Protein Family : Pectin lyase-like superfamily protein 124345334

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  19

19 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g013309m.g (1 of 53) 3.2.1.15 - Polygalacturonase / Pectinase C. sinensis v1.1 4195   scaffold00396: 115254-119448
AT1G70500 (1 of 2) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED A. thaliana TAIR10 2151   Chr1: 26566579-26568729
AT1G80170 (1 of 56) 3.2.1.15 - Polygalacturonase / Pectinase A. thaliana TAIR10 2306   Chr1: 30153408-30155713
Thhalv10018548m.g (1 of 52) 3.2.1.15 - Polygalacturonase / Pectinase E. salsugineum v1.0 2357   scaffold_9: 171552-173908
Thhalv10019797m.g (1 of 1) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED E. salsugineum v1.0 2151   scaffold_9: 4437787-4439937
Ciclev10027523m.g (1 of 26) 3.2.1.15 - Polygalacturonase / Pectinase C. clementina v1.0 4039   scaffold_7: 11093533-11097571
Gorai.010G226900 (1 of 55) 3.2.1.15 - Polygalacturonase / Pectinase G. raimondii v2.1 3936   Chr10: 59826282-59830217
Thecc1EG028279 (1 of 39) 3.2.1.15 - Polygalacturonase / Pectinase T. cacao v1.1 5310   scaffold_6: 13225300-13230609
Araha.2878s0012 (1 of 46) 3.2.1.15 - Polygalacturonase / Pectinase A. halleri v1.1 2420   Scaffold2878: 48069-50488
Araha.32519s0003 (1 of 2) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED A. halleri v1.1 2399   Scaffold32519: 5001-7399
Cagra.1777s0022 (1 of 1) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED C. grandiflora v1.1 2230   Scaffold1777: 111996-114225
Cagra.3834s0015 (1 of 46) 3.2.1.15 - Polygalacturonase / Pectinase C. grandiflora v1.1 2416   Scaffold3834: 72466-74881
Brara.G02021 (1 of 76) 3.2.1.15 - Polygalacturonase / Pectinase B. rapa FPsc v1.3 2376   A07: 18159027-18161402
Brara.G02971 (1 of 3) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED B. rapa FPsc v1.3 2287   A07: 23646574-23648860
Bostr.10273s0309 (1 of 2) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED B. stricta v1.2 2308   Scaffold10273: 1742236-1744543
AL2G29870 (1 of 1) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED A. lyrata v2.1 2136   scaffold_2: 14450522-14452657
AL2G41340 (1 of 49) 3.2.1.15 - Polygalacturonase / Pectinase A. lyrata v2.1 2381   scaffold_2: 19134487-19136867
Carub.0005s0105 (1 of 52) 3.2.1.15 - Polygalacturonase / Pectinase C. rubella v1.1 2384   scaffold_5: 431424-433807
Carub.0002s1718 (1 of 2) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED C. rubella v1.1 2196   scaffold_2: 10021284-10023479

19 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT1G80170.1 A. thaliana TAIR10 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
Thecc1EG028279t1 T. cacao v1.1 124345334 Pectin lyase-like superfamily protein 1 5266 SBM
Araha.2878s0012.1.p A. halleri v1.1 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
Brara.G02971.1.p B. rapa FPsc v1.3 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
orange1.1g013309m C. sinensis v1.1 124345334 Pectin lyase-like superfamily protein 1 5266 SBM
AT1G70500.1 A. thaliana TAIR10 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
Thhalv10018548m E. salsugineum v1.0 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
Thhalv10019797m E. salsugineum v1.0 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
Ciclev10027523m C. clementina v1.0 124345334 Pectin lyase-like superfamily protein 1 5266 SBM
Gorai.010G226900.1 G. raimondii v2.1 124345334 Pectin lyase-like superfamily protein 1 5266 SBM
Araha.32519s0003.1.p A. halleri v1.1 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
Cagra.1777s0022.1.p C. grandiflora v1.1 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
Cagra.3834s0015.1.p C. grandiflora v1.1 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
Brara.G02021.1.p B. rapa FPsc v1.3 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
Bostr.10273s0309.1.p B. stricta v1.2 124345334 Pectin lyase-like superfamily protein 1 5266 SBM
AL2G41340.t1 A. lyrata v2.1 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
AL2G29870.t1 A. lyrata v2.1 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
Carub.0002s1718.1.p C. rubella v1.1 124345334 Pectin lyase-like superfamily protein 2 5266 SBM
Carub.0005s0105.1.p C. rubella v1.1 124345334 Pectin lyase-like superfamily protein 2 5266 SBM