Gene : Thhalv10019797m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Genomic Order:  1027
Name:  ? Thhalv10019797m.g Secondary Identifier:  ? PAC:20191688
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1081 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10019797m.g 0.5kb upstream 0.5kb upstream 2651 true scaffold_9: 4437287-4439937 Eutrema salsugineum
Thhalv10019797m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4437287-4437786 Eutrema salsugineum
Thhalv10019797m.g 0.5kb downstream 0.5kb downstream 2651 true scaffold_9: 4437787-4440437 Eutrema salsugineum
Thhalv10019797m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4439938-4440437 Eutrema salsugineum
Thhalv10019797m.g 1.0kb upstream 1.0kb upstream 3151 true scaffold_9: 4436787-4439937 Eutrema salsugineum
Thhalv10019797m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4436787-4437786 Eutrema salsugineum
Thhalv10019797m.g 1.0kb downstream 1.0kb downstream 3151 true scaffold_9: 4437787-4440937 Eutrema salsugineum
Thhalv10019797m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4439938-4440937 Eutrema salsugineum
Thhalv10019797m.g 2.0kb upstream 2.0kb upstream 4151 true scaffold_9: 4435787-4439937 Eutrema salsugineum
Thhalv10019797m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4435787-4437786 Eutrema salsugineum
Thhalv10019797m.g 2.0kb downstream 2.0kb downstream 4151 true scaffold_9: 4437787-4441937 Eutrema salsugineum
Thhalv10019797m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4439938-4441937 Eutrema salsugineum
Thhalv10019797m.g 5.0kb upstream 5.0kb upstream 7151 true scaffold_9: 4432787-4439937 Eutrema salsugineum
Thhalv10019797m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4432787-4437786 Eutrema salsugineum
Thhalv10019797m.g 5.0kb downstream 5.0kb downstream 7151 true scaffold_9: 4437787-4444937 Eutrema salsugineum
Thhalv10019797m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4439938-4444937 Eutrema salsugineum
Thhalv10019797m.g 10.0kb upstream 10.0kb upstream 12151 true scaffold_9: 4427787-4439937 Eutrema salsugineum
Thhalv10019797m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4427787-4437786 Eutrema salsugineum
Thhalv10019797m.g 10.0kb downstream 10.0kb downstream 12151 true scaffold_9: 4437787-4449937 Eutrema salsugineum
Thhalv10019797m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4439938-4449937 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370843 5261 Brassicaceae View MSA
123841126 5264 Brassicales-Malvales View MSA
124345334 5266 SBM View MSA
124254286 5268 Malvidae View MSA
124062237 5270 Rosid View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain