Gene : Bostr.10273s0215 B. stricta v1.2

Defline:  (1 of 1) PTHR12217 - LIGATIN Genomic Order:  215
Name:  ? Bostr.10273s0215 Secondary Identifier:  ? PAC:30656643

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10273s0215 0.5kb upstream 0.5kb upstream 3563 true Scaffold10273: 1188884-1192446 Boechera stricta
Bostr.10273s0215 0.5kb upstream 0.5kb upstream 500 false Scaffold10273: 1188884-1189383 Boechera stricta
Bostr.10273s0215 0.5kb downstream 0.5kb downstream 3563 true Scaffold10273: 1189384-1192946 Boechera stricta
Bostr.10273s0215 0.5kb downstream 0.5kb downstream 500 false Scaffold10273: 1192447-1192946 Boechera stricta
Bostr.10273s0215 1.0kb upstream 1.0kb upstream 4063 true Scaffold10273: 1188384-1192446 Boechera stricta
Bostr.10273s0215 1.0kb upstream 1.0kb upstream 1000 false Scaffold10273: 1188384-1189383 Boechera stricta
Bostr.10273s0215 1.0kb downstream 1.0kb downstream 4063 true Scaffold10273: 1189384-1193446 Boechera stricta
Bostr.10273s0215 1.0kb downstream 1.0kb downstream 1000 false Scaffold10273: 1192447-1193446 Boechera stricta
Bostr.10273s0215 2.0kb upstream 2.0kb upstream 5063 true Scaffold10273: 1187384-1192446 Boechera stricta
Bostr.10273s0215 2.0kb upstream 2.0kb upstream 2000 false Scaffold10273: 1187384-1189383 Boechera stricta
Bostr.10273s0215 2.0kb downstream 2.0kb downstream 5063 true Scaffold10273: 1189384-1194446 Boechera stricta
Bostr.10273s0215 2.0kb downstream 2.0kb downstream 2000 false Scaffold10273: 1192447-1194446 Boechera stricta
Bostr.10273s0215 5.0kb upstream 5.0kb upstream 8063 true Scaffold10273: 1184384-1192446 Boechera stricta
Bostr.10273s0215 5.0kb upstream 5.0kb upstream 5000 false Scaffold10273: 1184384-1189383 Boechera stricta
Bostr.10273s0215 5.0kb downstream 5.0kb downstream 8063 true Scaffold10273: 1189384-1197446 Boechera stricta
Bostr.10273s0215 5.0kb downstream 5.0kb downstream 5000 false Scaffold10273: 1192447-1197446 Boechera stricta
Bostr.10273s0215 10.0kb upstream 10.0kb upstream 13063 true Scaffold10273: 1179384-1192446 Boechera stricta
Bostr.10273s0215 10.0kb upstream 10.0kb upstream 10000 false Scaffold10273: 1179384-1189383 Boechera stricta
Bostr.10273s0215 10.0kb downstream 10.0kb downstream 13063 true Scaffold10273: 1189384-1202446 Boechera stricta
Bostr.10273s0215 10.0kb downstream 10.0kb downstream 10000 false Scaffold10273: 1192447-1202446 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041515 5273 Angiosperm View MSA
122370090 5261 Brassicaceae View MSA
123833910 5264 Brassicales-Malvales View MSA
124340716 5266 SBM View MSA
124237428 5268 Malvidae View MSA
124063862 5270 Rosid View MSA
123737904 5271 Pentapetalae View MSA
122786176 5272 Eudicot View MSA
121347053 5274 Embryophyte View MSA
123424674 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain