Gene : Bostr.10273s0281 B. stricta v1.2

Defline:  (1 of 2) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Genomic Order:  281
Name:  ? Bostr.10273s0281 Secondary Identifier:  ? PAC:30656721

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLUCOSE1PMETAB-PWY Boechera stricta pathologic  
Bstricta GLYCOGENSYNTH-PWY Boechera stricta pathologic  
Bstricta PWY-3801 Boechera stricta pathologic  
Bstricta PWY-622 Boechera stricta pathologic  
Bstricta PWY66-422 Boechera stricta pathologic  
Bstricta PWY-7238 Boechera stricta pathologic  
Bstricta PWY-7343 Boechera stricta pathologic  
Bstricta SUCSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10273s0281 0.5kb upstream 0.5kb upstream 4938 true Scaffold10273: 1580337-1585274 Boechera stricta
Bostr.10273s0281 0.5kb upstream 0.5kb upstream 500 false Scaffold10273: 1580337-1580836 Boechera stricta
Bostr.10273s0281 0.5kb downstream 0.5kb downstream 4938 true Scaffold10273: 1580837-1585774 Boechera stricta
Bostr.10273s0281 0.5kb downstream 0.5kb downstream 500 false Scaffold10273: 1585275-1585774 Boechera stricta
Bostr.10273s0281 1.0kb upstream 1.0kb upstream 5438 true Scaffold10273: 1579837-1585274 Boechera stricta
Bostr.10273s0281 1.0kb upstream 1.0kb upstream 1000 false Scaffold10273: 1579837-1580836 Boechera stricta
Bostr.10273s0281 1.0kb downstream 1.0kb downstream 5438 true Scaffold10273: 1580837-1586274 Boechera stricta
Bostr.10273s0281 1.0kb downstream 1.0kb downstream 1000 false Scaffold10273: 1585275-1586274 Boechera stricta
Bostr.10273s0281 2.0kb upstream 2.0kb upstream 6438 true Scaffold10273: 1578837-1585274 Boechera stricta
Bostr.10273s0281 2.0kb upstream 2.0kb upstream 2000 false Scaffold10273: 1578837-1580836 Boechera stricta
Bostr.10273s0281 2.0kb downstream 2.0kb downstream 6438 true Scaffold10273: 1580837-1587274 Boechera stricta
Bostr.10273s0281 2.0kb downstream 2.0kb downstream 2000 false Scaffold10273: 1585275-1587274 Boechera stricta
Bostr.10273s0281 5.0kb upstream 5.0kb upstream 9438 true Scaffold10273: 1575837-1585274 Boechera stricta
Bostr.10273s0281 5.0kb upstream 5.0kb upstream 5000 false Scaffold10273: 1575837-1580836 Boechera stricta
Bostr.10273s0281 5.0kb downstream 5.0kb downstream 9438 true Scaffold10273: 1580837-1590274 Boechera stricta
Bostr.10273s0281 5.0kb downstream 5.0kb downstream 5000 false Scaffold10273: 1585275-1590274 Boechera stricta
Bostr.10273s0281 10.0kb upstream 10.0kb upstream 14438 true Scaffold10273: 1570837-1585274 Boechera stricta
Bostr.10273s0281 10.0kb upstream 10.0kb upstream 10000 false Scaffold10273: 1570837-1580836 Boechera stricta
Bostr.10273s0281 10.0kb downstream 10.0kb downstream 14438 true Scaffold10273: 1580837-1595274 Boechera stricta
Bostr.10273s0281 10.0kb downstream 10.0kb downstream 10000 false Scaffold10273: 1585275-1595274 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122382166 5261 Brassicaceae View MSA
123803717 5264 Brassicales-Malvales View MSA
124300797 5266 SBM View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain