Gene : Bostr.13129s0136 B. stricta v1.2
Defline:  (1 of 1) 2.5.1.61 - Hydroxymethylbilane synthase / Uroporphyrinogen synthetase Genomic Order:  136
Name:  ? Bostr.13129s0136 Secondary Identifier:  ? PAC:30673155
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5188 Boechera stricta pathologic  
Bstricta PWY-5918 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13129s0136 0.5kb upstream 0.5kb upstream 3003 true Scaffold13129: 557166-560168 Boechera stricta
Bostr.13129s0136 0.5kb upstream 0.5kb upstream 500 false Scaffold13129: 557166-557665 Boechera stricta
Bostr.13129s0136 0.5kb downstream 0.5kb downstream 3003 true Scaffold13129: 557666-560668 Boechera stricta
Bostr.13129s0136 0.5kb downstream 0.5kb downstream 500 false Scaffold13129: 560169-560668 Boechera stricta
Bostr.13129s0136 1.0kb upstream 1.0kb upstream 3503 true Scaffold13129: 556666-560168 Boechera stricta
Bostr.13129s0136 1.0kb upstream 1.0kb upstream 1000 false Scaffold13129: 556666-557665 Boechera stricta
Bostr.13129s0136 1.0kb downstream 1.0kb downstream 3503 true Scaffold13129: 557666-561168 Boechera stricta
Bostr.13129s0136 1.0kb downstream 1.0kb downstream 1000 false Scaffold13129: 560169-561168 Boechera stricta
Bostr.13129s0136 2.0kb upstream 2.0kb upstream 4503 true Scaffold13129: 555666-560168 Boechera stricta
Bostr.13129s0136 2.0kb upstream 2.0kb upstream 2000 false Scaffold13129: 555666-557665 Boechera stricta
Bostr.13129s0136 2.0kb downstream 2.0kb downstream 4503 true Scaffold13129: 557666-562168 Boechera stricta
Bostr.13129s0136 2.0kb downstream 2.0kb downstream 2000 false Scaffold13129: 560169-562168 Boechera stricta
Bostr.13129s0136 5.0kb upstream 5.0kb upstream 7503 true Scaffold13129: 552666-560168 Boechera stricta
Bostr.13129s0136 5.0kb upstream 5.0kb upstream 5000 false Scaffold13129: 552666-557665 Boechera stricta
Bostr.13129s0136 5.0kb downstream 5.0kb downstream 7503 true Scaffold13129: 557666-565168 Boechera stricta
Bostr.13129s0136 5.0kb downstream 5.0kb downstream 5000 false Scaffold13129: 560169-565168 Boechera stricta
Bostr.13129s0136 10.0kb upstream 10.0kb upstream 12503 true Scaffold13129: 547666-560168 Boechera stricta
Bostr.13129s0136 10.0kb upstream 10.0kb upstream 10000 false Scaffold13129: 547666-557665 Boechera stricta
Bostr.13129s0136 10.0kb downstream 10.0kb downstream 12503 true Scaffold13129: 557666-570168 Boechera stricta
Bostr.13129s0136 10.0kb downstream 10.0kb downstream 10000 false Scaffold13129: 560169-570168 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364293 5261 Brassicaceae View MSA
123830880 5264 Brassicales-Malvales View MSA
124350121 5266 SBM View MSA
124253286 5268 Malvidae View MSA
124064477 5270 Rosid View MSA
123748249 5271 Pentapetalae View MSA
122787678 5272 Eudicot View MSA
122042710 5273 Angiosperm View MSA
121348830 5274 Embryophyte View MSA
123423964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain