Gene : Bostr.12659s0180 B. stricta v1.2
Defline:  (1 of 2) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Genomic Order:  180
Name:  ? Bostr.12659s0180 Secondary Identifier:  ? PAC:30652260
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLUCOSE1PMETAB-PWY Boechera stricta pathologic  
Bstricta GLYCOGENSYNTH-PWY Boechera stricta pathologic  
Bstricta PWY-3801 Boechera stricta pathologic  
Bstricta PWY-622 Boechera stricta pathologic  
Bstricta PWY66-422 Boechera stricta pathologic  
Bstricta PWY-7238 Boechera stricta pathologic  
Bstricta PWY-7343 Boechera stricta pathologic  
Bstricta SUCSYN-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0180 0.5kb upstream 0.5kb upstream 5376 true Scaffold12659: 993253-998628 Boechera stricta
Bostr.12659s0180 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 993253-993752 Boechera stricta
Bostr.12659s0180 0.5kb downstream 0.5kb downstream 5376 true Scaffold12659: 993753-999128 Boechera stricta
Bostr.12659s0180 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 998629-999128 Boechera stricta
Bostr.12659s0180 1.0kb upstream 1.0kb upstream 5876 true Scaffold12659: 992753-998628 Boechera stricta
Bostr.12659s0180 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 992753-993752 Boechera stricta
Bostr.12659s0180 1.0kb downstream 1.0kb downstream 5876 true Scaffold12659: 993753-999628 Boechera stricta
Bostr.12659s0180 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 998629-999628 Boechera stricta
Bostr.12659s0180 2.0kb upstream 2.0kb upstream 6876 true Scaffold12659: 991753-998628 Boechera stricta
Bostr.12659s0180 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 991753-993752 Boechera stricta
Bostr.12659s0180 2.0kb downstream 2.0kb downstream 6876 true Scaffold12659: 993753-1000628 Boechera stricta
Bostr.12659s0180 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 998629-1000628 Boechera stricta
Bostr.12659s0180 5.0kb upstream 5.0kb upstream 9876 true Scaffold12659: 988753-998628 Boechera stricta
Bostr.12659s0180 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 988753-993752 Boechera stricta
Bostr.12659s0180 5.0kb downstream 5.0kb downstream 9876 true Scaffold12659: 993753-1003628 Boechera stricta
Bostr.12659s0180 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 998629-1003628 Boechera stricta
Bostr.12659s0180 10.0kb upstream 10.0kb upstream 14876 true Scaffold12659: 983753-998628 Boechera stricta
Bostr.12659s0180 10.0kb upstream 10.0kb upstream 10000 false Scaffold12659: 983753-993752 Boechera stricta
Bostr.12659s0180 10.0kb downstream 10.0kb downstream 14876 true Scaffold12659: 993753-1008628 Boechera stricta
Bostr.12659s0180 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 998629-1008628 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364390 5261 Brassicaceae View MSA
123835209 5264 Brassicales-Malvales View MSA
124342115 5266 SBM View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain