Gene : Bostr.12659s0117 B. stricta v1.2
Defline:  (1 of 2) PTHR10513 - DEOXYNUCLEOSIDE KINASE Genomic Order:  117
Name:  ? Bostr.12659s0117 Secondary Identifier:  ? PAC:30652522
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7199 Boechera stricta pathologic  
Bstricta PWY-7200 Boechera stricta pathologic  
Bstricta PWY-7224 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0117 0.5kb upstream 0.5kb upstream 3220 true Scaffold12659: 677705-680924 Boechera stricta
Bostr.12659s0117 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 677705-678204 Boechera stricta
Bostr.12659s0117 0.5kb downstream 0.5kb downstream 3220 true Scaffold12659: 678205-681424 Boechera stricta
Bostr.12659s0117 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 680925-681424 Boechera stricta
Bostr.12659s0117 1.0kb upstream 1.0kb upstream 3720 true Scaffold12659: 677205-680924 Boechera stricta
Bostr.12659s0117 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 677205-678204 Boechera stricta
Bostr.12659s0117 1.0kb downstream 1.0kb downstream 3720 true Scaffold12659: 678205-681924 Boechera stricta
Bostr.12659s0117 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 680925-681924 Boechera stricta
Bostr.12659s0117 2.0kb upstream 2.0kb upstream 4720 true Scaffold12659: 676205-680924 Boechera stricta
Bostr.12659s0117 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 676205-678204 Boechera stricta
Bostr.12659s0117 2.0kb downstream 2.0kb downstream 4720 true Scaffold12659: 678205-682924 Boechera stricta
Bostr.12659s0117 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 680925-682924 Boechera stricta
Bostr.12659s0117 5.0kb upstream 5.0kb upstream 7720 true Scaffold12659: 673205-680924 Boechera stricta
Bostr.12659s0117 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 673205-678204 Boechera stricta
Bostr.12659s0117 5.0kb downstream 5.0kb downstream 7720 true Scaffold12659: 678205-685924 Boechera stricta
Bostr.12659s0117 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 680925-685924 Boechera stricta
Bostr.12659s0117 10.0kb upstream 10.0kb upstream 12720 true Scaffold12659: 668205-680924 Boechera stricta
Bostr.12659s0117 10.0kb upstream 10.0kb upstream 10000 false Scaffold12659: 668205-678204 Boechera stricta
Bostr.12659s0117 10.0kb downstream 10.0kb downstream 12720 true Scaffold12659: 678205-690924 Boechera stricta
Bostr.12659s0117 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 680925-690924 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343847 5261 Brassicaceae View MSA
123837850 5264 Brassicales-Malvales View MSA
124343896 5266 SBM View MSA
124244992 5268 Malvidae View MSA
124064096 5270 Rosid View MSA
123742042 5271 Pentapetalae View MSA
122786834 5272 Eudicot View MSA
122044312 5273 Angiosperm View MSA
121349442 5274 Embryophyte View MSA
123425271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain