Gene : Bostr.13208s0003 B. stricta v1.2
Defline:  (1 of 2) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  3
Name:  ? Bostr.13208s0003 Secondary Identifier:  ? PAC:30674870
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta DETOX1-PWY-1 Boechera stricta pathologic  
Bstricta PWY-4081 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13208s0003 0.5kb upstream 0.5kb upstream 2048 true Scaffold13208: 4932-6979 Boechera stricta
Bostr.13208s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold13208: 6480-6979 Boechera stricta
Bostr.13208s0003 0.5kb downstream 0.5kb downstream 2048 true Scaffold13208: 4432-6479 Boechera stricta
Bostr.13208s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold13208: 4432-4931 Boechera stricta
Bostr.13208s0003 1.0kb upstream 1.0kb upstream 2548 true Scaffold13208: 4932-7479 Boechera stricta
Bostr.13208s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold13208: 6480-7479 Boechera stricta
Bostr.13208s0003 1.0kb downstream 1.0kb downstream 2548 true Scaffold13208: 3932-6479 Boechera stricta
Bostr.13208s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold13208: 3932-4931 Boechera stricta
Bostr.13208s0003 2.0kb upstream 2.0kb upstream 3548 true Scaffold13208: 4932-8479 Boechera stricta
Bostr.13208s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold13208: 6480-8479 Boechera stricta
Bostr.13208s0003 2.0kb downstream 2.0kb downstream 3548 true Scaffold13208: 2932-6479 Boechera stricta
Bostr.13208s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold13208: 2932-4931 Boechera stricta
Bostr.13208s0003 5.0kb upstream 5.0kb upstream 6548 true Scaffold13208: 4932-11479 Boechera stricta
Bostr.13208s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold13208: 6480-11479 Boechera stricta
Bostr.13208s0003 5.0kb downstream 5.0kb downstream 6479 true Scaffold13208: 1-6479 Boechera stricta
Bostr.13208s0003 5.0kb downstream 5.0kb downstream 4931 false Scaffold13208: 1-4931 Boechera stricta
Bostr.13208s0003 10.0kb upstream 10.0kb upstream 11548 true Scaffold13208: 4932-16479 Boechera stricta
Bostr.13208s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold13208: 6480-16479 Boechera stricta
Bostr.13208s0003 10.0kb downstream 10.0kb downstream 6479 true Scaffold13208: 1-6479 Boechera stricta
Bostr.13208s0003 10.0kb downstream 10.0kb downstream 4931 false Scaffold13208: 1-4931 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
122367831 5261 Brassicaceae View MSA
123836838 5264 Brassicales-Malvales View MSA
124339844 5266 SBM View MSA
124253459 5268 Malvidae View MSA
124065058 5270 Rosid View MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain