Gene : Bostr.13158s0217 B. stricta v1.2
Defline:  (1 of 1) PTHR11451:SF21 - BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE Genomic Order:  217
Name:  ? Bostr.13158s0217 Secondary Identifier:  ? PAC:30678512
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13158s0217 0.5kb upstream 0.5kb upstream 3812 true Scaffold13158: 1056338-1060149 Boechera stricta
Bostr.13158s0217 0.5kb upstream 0.5kb upstream 500 false Scaffold13158: 1059650-1060149 Boechera stricta
Bostr.13158s0217 0.5kb downstream 0.5kb downstream 3812 true Scaffold13158: 1055838-1059649 Boechera stricta
Bostr.13158s0217 0.5kb downstream 0.5kb downstream 500 false Scaffold13158: 1055838-1056337 Boechera stricta
Bostr.13158s0217 1.0kb upstream 1.0kb upstream 4312 true Scaffold13158: 1056338-1060649 Boechera stricta
Bostr.13158s0217 1.0kb upstream 1.0kb upstream 1000 false Scaffold13158: 1059650-1060649 Boechera stricta
Bostr.13158s0217 1.0kb downstream 1.0kb downstream 4312 true Scaffold13158: 1055338-1059649 Boechera stricta
Bostr.13158s0217 1.0kb downstream 1.0kb downstream 1000 false Scaffold13158: 1055338-1056337 Boechera stricta
Bostr.13158s0217 2.0kb upstream 2.0kb upstream 5312 true Scaffold13158: 1056338-1061649 Boechera stricta
Bostr.13158s0217 2.0kb upstream 2.0kb upstream 2000 false Scaffold13158: 1059650-1061649 Boechera stricta
Bostr.13158s0217 2.0kb downstream 2.0kb downstream 5312 true Scaffold13158: 1054338-1059649 Boechera stricta
Bostr.13158s0217 2.0kb downstream 2.0kb downstream 2000 false Scaffold13158: 1054338-1056337 Boechera stricta
Bostr.13158s0217 5.0kb upstream 5.0kb upstream 8312 true Scaffold13158: 1056338-1064649 Boechera stricta
Bostr.13158s0217 5.0kb upstream 5.0kb upstream 5000 false Scaffold13158: 1059650-1064649 Boechera stricta
Bostr.13158s0217 5.0kb downstream 5.0kb downstream 8312 true Scaffold13158: 1051338-1059649 Boechera stricta
Bostr.13158s0217 5.0kb downstream 5.0kb downstream 5000 false Scaffold13158: 1051338-1056337 Boechera stricta
Bostr.13158s0217 10.0kb upstream 10.0kb upstream 13312 true Scaffold13158: 1056338-1069649 Boechera stricta
Bostr.13158s0217 10.0kb upstream 10.0kb upstream 10000 false Scaffold13158: 1059650-1069649 Boechera stricta
Bostr.13158s0217 10.0kb downstream 10.0kb downstream 13312 true Scaffold13158: 1046338-1059649 Boechera stricta
Bostr.13158s0217 10.0kb downstream 10.0kb downstream 10000 false Scaffold13158: 1046338-1056337 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365316 5261 Brassicaceae View MSA
123831041 5264 Brassicales-Malvales View MSA
124348511 5266 SBM View MSA
124247467 5268 Malvidae View MSA
124064223 5270 Rosid View MSA
123739091 5271 Pentapetalae View MSA
122787738 5272 Eudicot View MSA
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain