Gene : Bostr.13129s0357 B. stricta v1.2

Defline:  (1 of 1) PTHR12786:SF2 - SPLICING FACTOR 3A SUBUNIT 3 Genomic Order:  357
Name:  ? Bostr.13129s0357 Secondary Identifier:  ? PAC:30673096

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13129s0357 0.5kb upstream 0.5kb upstream 4567 true Scaffold13129: 1645880-1650446 Boechera stricta
Bostr.13129s0357 0.5kb upstream 0.5kb upstream 500 false Scaffold13129: 1645880-1646379 Boechera stricta
Bostr.13129s0357 0.5kb downstream 0.5kb downstream 4567 true Scaffold13129: 1646380-1650946 Boechera stricta
Bostr.13129s0357 0.5kb downstream 0.5kb downstream 500 false Scaffold13129: 1650447-1650946 Boechera stricta
Bostr.13129s0357 1.0kb upstream 1.0kb upstream 5067 true Scaffold13129: 1645380-1650446 Boechera stricta
Bostr.13129s0357 1.0kb upstream 1.0kb upstream 1000 false Scaffold13129: 1645380-1646379 Boechera stricta
Bostr.13129s0357 1.0kb downstream 1.0kb downstream 5067 true Scaffold13129: 1646380-1651446 Boechera stricta
Bostr.13129s0357 1.0kb downstream 1.0kb downstream 1000 false Scaffold13129: 1650447-1651446 Boechera stricta
Bostr.13129s0357 2.0kb upstream 2.0kb upstream 6067 true Scaffold13129: 1644380-1650446 Boechera stricta
Bostr.13129s0357 2.0kb upstream 2.0kb upstream 2000 false Scaffold13129: 1644380-1646379 Boechera stricta
Bostr.13129s0357 2.0kb downstream 2.0kb downstream 6067 true Scaffold13129: 1646380-1652446 Boechera stricta
Bostr.13129s0357 2.0kb downstream 2.0kb downstream 2000 false Scaffold13129: 1650447-1652446 Boechera stricta
Bostr.13129s0357 5.0kb upstream 5.0kb upstream 9067 true Scaffold13129: 1641380-1650446 Boechera stricta
Bostr.13129s0357 5.0kb upstream 5.0kb upstream 5000 false Scaffold13129: 1641380-1646379 Boechera stricta
Bostr.13129s0357 5.0kb downstream 5.0kb downstream 9067 true Scaffold13129: 1646380-1655446 Boechera stricta
Bostr.13129s0357 5.0kb downstream 5.0kb downstream 5000 false Scaffold13129: 1650447-1655446 Boechera stricta
Bostr.13129s0357 10.0kb upstream 10.0kb upstream 14067 true Scaffold13129: 1636380-1650446 Boechera stricta
Bostr.13129s0357 10.0kb upstream 10.0kb upstream 10000 false Scaffold13129: 1636380-1646379 Boechera stricta
Bostr.13129s0357 10.0kb downstream 10.0kb downstream 14067 true Scaffold13129: 1646380-1660446 Boechera stricta
Bostr.13129s0357 10.0kb downstream 10.0kb downstream 10000 false Scaffold13129: 1650447-1660446 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362136 5261 Brassicaceae View MSA
123827576 5264 Brassicales-Malvales View MSA
124338404 5266 SBM View MSA
124237031 5268 Malvidae View MSA
124061347 5270 Rosid View MSA
123747659 5271 Pentapetalae View MSA
122793662 5272 Eudicot View MSA
122042756 5273 Angiosperm View MSA
123429134 5275 Viridiplantae View MSA
121345552 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain