Gene : Bostr.13129s0223 B. stricta v1.2
Defline:  (1 of 4) PTHR31321:SF23 - PECTINESTERASE PPME1-RELATED Genomic Order:  223
Name:  ? Bostr.13129s0223 Secondary Identifier:  ? PAC:30672930
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13129s0223 0.5kb upstream 0.5kb upstream 2307 true Scaffold13129: 1010591-1012897 Boechera stricta
Bostr.13129s0223 0.5kb upstream 0.5kb upstream 500 false Scaffold13129: 1012398-1012897 Boechera stricta
Bostr.13129s0223 0.5kb downstream 0.5kb downstream 2307 true Scaffold13129: 1010091-1012397 Boechera stricta
Bostr.13129s0223 0.5kb downstream 0.5kb downstream 500 false Scaffold13129: 1010091-1010590 Boechera stricta
Bostr.13129s0223 1.0kb upstream 1.0kb upstream 2807 true Scaffold13129: 1010591-1013397 Boechera stricta
Bostr.13129s0223 1.0kb upstream 1.0kb upstream 1000 false Scaffold13129: 1012398-1013397 Boechera stricta
Bostr.13129s0223 1.0kb downstream 1.0kb downstream 2807 true Scaffold13129: 1009591-1012397 Boechera stricta
Bostr.13129s0223 1.0kb downstream 1.0kb downstream 1000 false Scaffold13129: 1009591-1010590 Boechera stricta
Bostr.13129s0223 2.0kb upstream 2.0kb upstream 3807 true Scaffold13129: 1010591-1014397 Boechera stricta
Bostr.13129s0223 2.0kb upstream 2.0kb upstream 2000 false Scaffold13129: 1012398-1014397 Boechera stricta
Bostr.13129s0223 2.0kb downstream 2.0kb downstream 3807 true Scaffold13129: 1008591-1012397 Boechera stricta
Bostr.13129s0223 2.0kb downstream 2.0kb downstream 2000 false Scaffold13129: 1008591-1010590 Boechera stricta
Bostr.13129s0223 5.0kb upstream 5.0kb upstream 6807 true Scaffold13129: 1010591-1017397 Boechera stricta
Bostr.13129s0223 5.0kb upstream 5.0kb upstream 5000 false Scaffold13129: 1012398-1017397 Boechera stricta
Bostr.13129s0223 5.0kb downstream 5.0kb downstream 6807 true Scaffold13129: 1005591-1012397 Boechera stricta
Bostr.13129s0223 5.0kb downstream 5.0kb downstream 5000 false Scaffold13129: 1005591-1010590 Boechera stricta
Bostr.13129s0223 10.0kb upstream 10.0kb upstream 11807 true Scaffold13129: 1010591-1022397 Boechera stricta
Bostr.13129s0223 10.0kb upstream 10.0kb upstream 10000 false Scaffold13129: 1012398-1022397 Boechera stricta
Bostr.13129s0223 10.0kb downstream 10.0kb downstream 11807 true Scaffold13129: 1000591-1012397 Boechera stricta
Bostr.13129s0223 10.0kb downstream 10.0kb downstream 10000 false Scaffold13129: 1000591-1010590 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372248 5261 Brassicaceae View MSA
123841334 5264 Brassicales-Malvales View MSA
124322903 5266 SBM View MSA
124253324 5268 Malvidae View MSA
124071696 5270 Rosid View MSA
123740013 5271 Pentapetalae View MSA
122792940 5272 Eudicot View MSA
122051382 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain