Gene : Bostr.14547s0004 B. stricta v1.2
Defline:  (1 of 1) PTHR23084:SF156 - RADIAL SPOKE HEAD 10 HOMOLOG B2 Genomic Order:  4
Name:  ? Bostr.14547s0004 Secondary Identifier:  ? PAC:30672060
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6351 Boechera stricta pathologic  
Bstricta PWY-6352 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.14547s0004 0.5kb upstream 0.5kb upstream 2469 true Scaffold14547: 36325-38793 Boechera stricta
Bostr.14547s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold14547: 38294-38793 Boechera stricta
Bostr.14547s0004 0.5kb downstream 0.5kb downstream 2469 true Scaffold14547: 35825-38293 Boechera stricta
Bostr.14547s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold14547: 35825-36324 Boechera stricta
Bostr.14547s0004 1.0kb upstream 1.0kb upstream 2969 true Scaffold14547: 36325-39293 Boechera stricta
Bostr.14547s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold14547: 38294-39293 Boechera stricta
Bostr.14547s0004 1.0kb downstream 1.0kb downstream 2969 true Scaffold14547: 35325-38293 Boechera stricta
Bostr.14547s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold14547: 35325-36324 Boechera stricta
Bostr.14547s0004 2.0kb upstream 2.0kb upstream 3969 true Scaffold14547: 36325-40293 Boechera stricta
Bostr.14547s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold14547: 38294-40293 Boechera stricta
Bostr.14547s0004 2.0kb downstream 2.0kb downstream 3969 true Scaffold14547: 34325-38293 Boechera stricta
Bostr.14547s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold14547: 34325-36324 Boechera stricta
Bostr.14547s0004 5.0kb upstream 5.0kb upstream 6969 true Scaffold14547: 36325-43293 Boechera stricta
Bostr.14547s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold14547: 38294-43293 Boechera stricta
Bostr.14547s0004 5.0kb downstream 5.0kb downstream 6969 true Scaffold14547: 31325-38293 Boechera stricta
Bostr.14547s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold14547: 31325-36324 Boechera stricta
Bostr.14547s0004 10.0kb upstream 10.0kb upstream 11969 true Scaffold14547: 36325-48293 Boechera stricta
Bostr.14547s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold14547: 38294-48293 Boechera stricta
Bostr.14547s0004 10.0kb downstream 10.0kb downstream 11969 true Scaffold14547: 26325-38293 Boechera stricta
Bostr.14547s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold14547: 26325-36324 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377573 5261 Brassicaceae View MSA
123839636 5264 Brassicales-Malvales View MSA
124340371 5266 SBM View MSA
124254332 5268 Malvidae View MSA
124068935 5270 Rosid View MSA
123741886 5271 Pentapetalae View MSA
122788830 5272 Eudicot View MSA
122047970 5273 Angiosperm View MSA
121346800 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain