Gene : Bostr.7867s1334 B. stricta v1.2
Defline:  (1 of 2) 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase Genomic Order:  1334
Name:  ? Bostr.7867s1334 Secondary Identifier:  ? PAC:30658148
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6121 Boechera stricta pathologic  
Bstricta PWY-841 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1334 0.5kb upstream 0.5kb upstream 2183 true Scaffold7867: 6786799-6788981 Boechera stricta
Bostr.7867s1334 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 6788482-6788981 Boechera stricta
Bostr.7867s1334 0.5kb downstream 0.5kb downstream 2183 true Scaffold7867: 6786299-6788481 Boechera stricta
Bostr.7867s1334 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 6786299-6786798 Boechera stricta
Bostr.7867s1334 1.0kb upstream 1.0kb upstream 2683 true Scaffold7867: 6786799-6789481 Boechera stricta
Bostr.7867s1334 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 6788482-6789481 Boechera stricta
Bostr.7867s1334 1.0kb downstream 1.0kb downstream 2683 true Scaffold7867: 6785799-6788481 Boechera stricta
Bostr.7867s1334 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 6785799-6786798 Boechera stricta
Bostr.7867s1334 2.0kb upstream 2.0kb upstream 3683 true Scaffold7867: 6786799-6790481 Boechera stricta
Bostr.7867s1334 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 6788482-6790481 Boechera stricta
Bostr.7867s1334 2.0kb downstream 2.0kb downstream 3683 true Scaffold7867: 6784799-6788481 Boechera stricta
Bostr.7867s1334 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 6784799-6786798 Boechera stricta
Bostr.7867s1334 5.0kb upstream 5.0kb upstream 6683 true Scaffold7867: 6786799-6793481 Boechera stricta
Bostr.7867s1334 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 6788482-6793481 Boechera stricta
Bostr.7867s1334 5.0kb downstream 5.0kb downstream 6683 true Scaffold7867: 6781799-6788481 Boechera stricta
Bostr.7867s1334 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 6781799-6786798 Boechera stricta
Bostr.7867s1334 10.0kb upstream 10.0kb upstream 11683 true Scaffold7867: 6786799-6798481 Boechera stricta
Bostr.7867s1334 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 6788482-6798481 Boechera stricta
Bostr.7867s1334 10.0kb downstream 10.0kb downstream 11683 true Scaffold7867: 6776799-6788481 Boechera stricta
Bostr.7867s1334 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 6776799-6786798 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366974 5261 Brassicaceae View MSA
123837649 5264 Brassicales-Malvales View MSA
124343225 5266 SBM View MSA
124253609 5268 Malvidae View MSA
124066894 5270 Rosid View MSA
123745700 5271 Pentapetalae View MSA
122790878 5272 Eudicot View MSA
122046645 5273 Angiosperm View MSA
121350725 5274 Embryophyte View MSA
123425714 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain