Gene : Bostr.15774s0236 B. stricta v1.2
Defline:  (1 of 4) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  236
Name:  ? Bostr.15774s0236 Secondary Identifier:  ? PAC:30666008
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  
Bstricta PWY-5690 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15774s0236 0.5kb upstream 0.5kb upstream 4551 true Scaffold15774: 2453768-2458318 Boechera stricta
Bostr.15774s0236 0.5kb upstream 0.5kb upstream 500 false Scaffold15774: 2453768-2454267 Boechera stricta
Bostr.15774s0236 0.5kb downstream 0.5kb downstream 4551 true Scaffold15774: 2454268-2458818 Boechera stricta
Bostr.15774s0236 0.5kb downstream 0.5kb downstream 500 false Scaffold15774: 2458319-2458818 Boechera stricta
Bostr.15774s0236 1.0kb upstream 1.0kb upstream 5051 true Scaffold15774: 2453268-2458318 Boechera stricta
Bostr.15774s0236 1.0kb upstream 1.0kb upstream 1000 false Scaffold15774: 2453268-2454267 Boechera stricta
Bostr.15774s0236 1.0kb downstream 1.0kb downstream 5051 true Scaffold15774: 2454268-2459318 Boechera stricta
Bostr.15774s0236 1.0kb downstream 1.0kb downstream 1000 false Scaffold15774: 2458319-2459318 Boechera stricta
Bostr.15774s0236 2.0kb upstream 2.0kb upstream 6051 true Scaffold15774: 2452268-2458318 Boechera stricta
Bostr.15774s0236 2.0kb upstream 2.0kb upstream 2000 false Scaffold15774: 2452268-2454267 Boechera stricta
Bostr.15774s0236 2.0kb downstream 2.0kb downstream 6051 true Scaffold15774: 2454268-2460318 Boechera stricta
Bostr.15774s0236 2.0kb downstream 2.0kb downstream 2000 false Scaffold15774: 2458319-2460318 Boechera stricta
Bostr.15774s0236 5.0kb upstream 5.0kb upstream 9051 true Scaffold15774: 2449268-2458318 Boechera stricta
Bostr.15774s0236 5.0kb upstream 5.0kb upstream 5000 false Scaffold15774: 2449268-2454267 Boechera stricta
Bostr.15774s0236 5.0kb downstream 5.0kb downstream 9051 true Scaffold15774: 2454268-2463318 Boechera stricta
Bostr.15774s0236 5.0kb downstream 5.0kb downstream 5000 false Scaffold15774: 2458319-2463318 Boechera stricta
Bostr.15774s0236 10.0kb upstream 10.0kb upstream 14051 true Scaffold15774: 2444268-2458318 Boechera stricta
Bostr.15774s0236 10.0kb upstream 10.0kb upstream 10000 false Scaffold15774: 2444268-2454267 Boechera stricta
Bostr.15774s0236 10.0kb downstream 10.0kb downstream 14051 true Scaffold15774: 2454268-2468318 Boechera stricta
Bostr.15774s0236 10.0kb downstream 10.0kb downstream 10000 false Scaffold15774: 2458319-2468318 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121501210 5273 Angiosperm Singleton cluster - no MSA
122340915 5261 Brassicaceae Singleton cluster - no MSA
123781336 5264 Brassicales-Malvales Singleton cluster - no MSA
124279626 5266 SBM Singleton cluster - no MSA
124134562 5268 Malvidae Singleton cluster - no MSA
123862640 5270 Rosid Singleton cluster - no MSA
123448101 5271 Pentapetalae Singleton cluster - no MSA
122483641 5272 Eudicot Singleton cluster - no MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain