Gene : Bostr.15774s0237 B. stricta v1.2
Defline:  (1 of 4) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  237
Name:  ? Bostr.15774s0237 Secondary Identifier:  ? PAC:30665990
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  
Bstricta PWY-5690 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15774s0237 0.5kb upstream 0.5kb upstream 6089 true Scaffold15774: 2478910-2484998 Boechera stricta
Bostr.15774s0237 0.5kb upstream 0.5kb upstream 500 false Scaffold15774: 2478910-2479409 Boechera stricta
Bostr.15774s0237 0.5kb downstream 0.5kb downstream 6089 true Scaffold15774: 2479410-2485498 Boechera stricta
Bostr.15774s0237 0.5kb downstream 0.5kb downstream 500 false Scaffold15774: 2484999-2485498 Boechera stricta
Bostr.15774s0237 1.0kb upstream 1.0kb upstream 6589 true Scaffold15774: 2478410-2484998 Boechera stricta
Bostr.15774s0237 1.0kb upstream 1.0kb upstream 1000 false Scaffold15774: 2478410-2479409 Boechera stricta
Bostr.15774s0237 1.0kb downstream 1.0kb downstream 6589 true Scaffold15774: 2479410-2485998 Boechera stricta
Bostr.15774s0237 1.0kb downstream 1.0kb downstream 1000 false Scaffold15774: 2484999-2485998 Boechera stricta
Bostr.15774s0237 2.0kb upstream 2.0kb upstream 7589 true Scaffold15774: 2477410-2484998 Boechera stricta
Bostr.15774s0237 2.0kb upstream 2.0kb upstream 2000 false Scaffold15774: 2477410-2479409 Boechera stricta
Bostr.15774s0237 2.0kb downstream 2.0kb downstream 7589 true Scaffold15774: 2479410-2486998 Boechera stricta
Bostr.15774s0237 2.0kb downstream 2.0kb downstream 2000 false Scaffold15774: 2484999-2486998 Boechera stricta
Bostr.15774s0237 5.0kb upstream 5.0kb upstream 10589 true Scaffold15774: 2474410-2484998 Boechera stricta
Bostr.15774s0237 5.0kb upstream 5.0kb upstream 5000 false Scaffold15774: 2474410-2479409 Boechera stricta
Bostr.15774s0237 5.0kb downstream 5.0kb downstream 10589 true Scaffold15774: 2479410-2489998 Boechera stricta
Bostr.15774s0237 5.0kb downstream 5.0kb downstream 5000 false Scaffold15774: 2484999-2489998 Boechera stricta
Bostr.15774s0237 10.0kb upstream 10.0kb upstream 15589 true Scaffold15774: 2469410-2484998 Boechera stricta
Bostr.15774s0237 10.0kb upstream 10.0kb upstream 10000 false Scaffold15774: 2469410-2479409 Boechera stricta
Bostr.15774s0237 10.0kb downstream 10.0kb downstream 15589 true Scaffold15774: 2479410-2494998 Boechera stricta
Bostr.15774s0237 10.0kb downstream 10.0kb downstream 10000 false Scaffold15774: 2484999-2494998 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373971 5261 Brassicaceae View MSA
123829006 5264 Brassicales-Malvales View MSA
124336503 5266 SBM View MSA
124247146 5268 Malvidae View MSA
124069053 5270 Rosid View MSA
123742189 5271 Pentapetalae View MSA
122791396 5272 Eudicot View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain