Gene : Bostr.15697s0219 B. stricta v1.2

Defline:  (1 of 1) PTHR13464 - TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP Genomic Order:  219
Name:  ? Bostr.15697s0219 Secondary Identifier:  ? PAC:30662266

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15697s0219 0.5kb upstream 0.5kb upstream 3782 true Scaffold15697: 1310978-1314759 Boechera stricta
Bostr.15697s0219 0.5kb upstream 0.5kb upstream 500 false Scaffold15697: 1310978-1311477 Boechera stricta
Bostr.15697s0219 0.5kb downstream 0.5kb downstream 3782 true Scaffold15697: 1311478-1315259 Boechera stricta
Bostr.15697s0219 0.5kb downstream 0.5kb downstream 500 false Scaffold15697: 1314760-1315259 Boechera stricta
Bostr.15697s0219 1.0kb upstream 1.0kb upstream 4282 true Scaffold15697: 1310478-1314759 Boechera stricta
Bostr.15697s0219 1.0kb upstream 1.0kb upstream 1000 false Scaffold15697: 1310478-1311477 Boechera stricta
Bostr.15697s0219 1.0kb downstream 1.0kb downstream 4282 true Scaffold15697: 1311478-1315759 Boechera stricta
Bostr.15697s0219 1.0kb downstream 1.0kb downstream 1000 false Scaffold15697: 1314760-1315759 Boechera stricta
Bostr.15697s0219 2.0kb upstream 2.0kb upstream 5282 true Scaffold15697: 1309478-1314759 Boechera stricta
Bostr.15697s0219 2.0kb upstream 2.0kb upstream 2000 false Scaffold15697: 1309478-1311477 Boechera stricta
Bostr.15697s0219 2.0kb downstream 2.0kb downstream 5282 true Scaffold15697: 1311478-1316759 Boechera stricta
Bostr.15697s0219 2.0kb downstream 2.0kb downstream 2000 false Scaffold15697: 1314760-1316759 Boechera stricta
Bostr.15697s0219 5.0kb upstream 5.0kb upstream 8282 true Scaffold15697: 1306478-1314759 Boechera stricta
Bostr.15697s0219 5.0kb upstream 5.0kb upstream 5000 false Scaffold15697: 1306478-1311477 Boechera stricta
Bostr.15697s0219 5.0kb downstream 5.0kb downstream 8282 true Scaffold15697: 1311478-1319759 Boechera stricta
Bostr.15697s0219 5.0kb downstream 5.0kb downstream 5000 false Scaffold15697: 1314760-1319759 Boechera stricta
Bostr.15697s0219 10.0kb upstream 10.0kb upstream 13282 true Scaffold15697: 1301478-1314759 Boechera stricta
Bostr.15697s0219 10.0kb upstream 10.0kb upstream 10000 false Scaffold15697: 1301478-1311477 Boechera stricta
Bostr.15697s0219 10.0kb downstream 10.0kb downstream 13282 true Scaffold15697: 1311478-1324759 Boechera stricta
Bostr.15697s0219 10.0kb downstream 10.0kb downstream 10000 false Scaffold15697: 1314760-1324759 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361317 5261 Brassicaceae View MSA
123833240 5264 Brassicales-Malvales View MSA
124338784 5266 SBM View MSA
124250561 5268 Malvidae View MSA
124067157 5270 Rosid View MSA
123739885 5271 Pentapetalae View MSA
122794219 5272 Eudicot View MSA
122042858 5273 Angiosperm View MSA
123429181 5275 Viridiplantae View MSA
121344834 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain