Gene : Bostr.15697s0236 B. stricta v1.2
Defline:  (1 of 2) PTHR33596:SF3 - COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  236
Name:  ? Bostr.15697s0236 Secondary Identifier:  ? PAC:30662516
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15697s0236 0.5kb upstream 0.5kb upstream 2226 true Scaffold15697: 1428751-1430976 Boechera stricta
Bostr.15697s0236 0.5kb upstream 0.5kb upstream 500 false Scaffold15697: 1430477-1430976 Boechera stricta
Bostr.15697s0236 0.5kb downstream 0.5kb downstream 2226 true Scaffold15697: 1428251-1430476 Boechera stricta
Bostr.15697s0236 0.5kb downstream 0.5kb downstream 500 false Scaffold15697: 1428251-1428750 Boechera stricta
Bostr.15697s0236 1.0kb upstream 1.0kb upstream 2726 true Scaffold15697: 1428751-1431476 Boechera stricta
Bostr.15697s0236 1.0kb upstream 1.0kb upstream 1000 false Scaffold15697: 1430477-1431476 Boechera stricta
Bostr.15697s0236 1.0kb downstream 1.0kb downstream 2726 true Scaffold15697: 1427751-1430476 Boechera stricta
Bostr.15697s0236 1.0kb downstream 1.0kb downstream 1000 false Scaffold15697: 1427751-1428750 Boechera stricta
Bostr.15697s0236 2.0kb upstream 2.0kb upstream 3726 true Scaffold15697: 1428751-1432476 Boechera stricta
Bostr.15697s0236 2.0kb upstream 2.0kb upstream 2000 false Scaffold15697: 1430477-1432476 Boechera stricta
Bostr.15697s0236 2.0kb downstream 2.0kb downstream 3726 true Scaffold15697: 1426751-1430476 Boechera stricta
Bostr.15697s0236 2.0kb downstream 2.0kb downstream 2000 false Scaffold15697: 1426751-1428750 Boechera stricta
Bostr.15697s0236 5.0kb upstream 5.0kb upstream 6726 true Scaffold15697: 1428751-1435476 Boechera stricta
Bostr.15697s0236 5.0kb upstream 5.0kb upstream 5000 false Scaffold15697: 1430477-1435476 Boechera stricta
Bostr.15697s0236 5.0kb downstream 5.0kb downstream 6726 true Scaffold15697: 1423751-1430476 Boechera stricta
Bostr.15697s0236 5.0kb downstream 5.0kb downstream 5000 false Scaffold15697: 1423751-1428750 Boechera stricta
Bostr.15697s0236 10.0kb upstream 10.0kb upstream 11726 true Scaffold15697: 1428751-1440476 Boechera stricta
Bostr.15697s0236 10.0kb upstream 10.0kb upstream 10000 false Scaffold15697: 1430477-1440476 Boechera stricta
Bostr.15697s0236 10.0kb downstream 10.0kb downstream 11726 true Scaffold15697: 1418751-1430476 Boechera stricta
Bostr.15697s0236 10.0kb downstream 10.0kb downstream 10000 false Scaffold15697: 1418751-1428750 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026496 5273 Angiosperm View MSA
122365807 5261 Brassicaceae View MSA
123829674 5264 Brassicales-Malvales View MSA
124346697 5266 SBM View MSA
124242929 5268 Malvidae View MSA
124068573 5270 Rosid View MSA
123739751 5271 Pentapetalae View MSA
122786208 5272 Eudicot View MSA
121350668 5274 Embryophyte View MSA
123381843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain