Gene : Bostr.15697s0012 B. stricta v1.2
Defline:  (1 of 6) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Genomic Order:  12
Name:  ? Bostr.15697s0012 Secondary Identifier:  ? PAC:30662396
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5083 Boechera stricta pathologic  
Bstricta PWY-6348 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15697s0012 0.5kb upstream 0.5kb upstream 2384 true Scaffold15697: 54099-56482 Boechera stricta
Bostr.15697s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold15697: 54099-54598 Boechera stricta
Bostr.15697s0012 0.5kb downstream 0.5kb downstream 2384 true Scaffold15697: 54599-56982 Boechera stricta
Bostr.15697s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold15697: 56483-56982 Boechera stricta
Bostr.15697s0012 1.0kb upstream 1.0kb upstream 2884 true Scaffold15697: 53599-56482 Boechera stricta
Bostr.15697s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold15697: 53599-54598 Boechera stricta
Bostr.15697s0012 1.0kb downstream 1.0kb downstream 2884 true Scaffold15697: 54599-57482 Boechera stricta
Bostr.15697s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold15697: 56483-57482 Boechera stricta
Bostr.15697s0012 2.0kb upstream 2.0kb upstream 3884 true Scaffold15697: 52599-56482 Boechera stricta
Bostr.15697s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold15697: 52599-54598 Boechera stricta
Bostr.15697s0012 2.0kb downstream 2.0kb downstream 3884 true Scaffold15697: 54599-58482 Boechera stricta
Bostr.15697s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold15697: 56483-58482 Boechera stricta
Bostr.15697s0012 5.0kb upstream 5.0kb upstream 6884 true Scaffold15697: 49599-56482 Boechera stricta
Bostr.15697s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold15697: 49599-54598 Boechera stricta
Bostr.15697s0012 5.0kb downstream 5.0kb downstream 6884 true Scaffold15697: 54599-61482 Boechera stricta
Bostr.15697s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold15697: 56483-61482 Boechera stricta
Bostr.15697s0012 10.0kb upstream 10.0kb upstream 11884 true Scaffold15697: 44599-56482 Boechera stricta
Bostr.15697s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold15697: 44599-54598 Boechera stricta
Bostr.15697s0012 10.0kb downstream 10.0kb downstream 11884 true Scaffold15697: 54599-66482 Boechera stricta
Bostr.15697s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold15697: 56483-66482 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364034 5261 Brassicaceae View MSA
123841578 5264 Brassicales-Malvales View MSA
124349660 5266 SBM View MSA
124248897 5268 Malvidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain