Gene : Bostr.18473s0038 B. stricta v1.2
Defline:  (1 of 3) PTHR11972:SF62 - FERRIC REDUCTION OXIDASE 4-RELATED Genomic Order:  38
Name:  ? Bostr.18473s0038 Secondary Identifier:  ? PAC:30667171
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5934 Boechera stricta pathologic  
Bstricta PWY-6854 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18473s0038 0.5kb upstream 0.5kb upstream 4051 true Scaffold18473: 207037-211087 Boechera stricta
Bostr.18473s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold18473: 207037-207536 Boechera stricta
Bostr.18473s0038 0.5kb downstream 0.5kb downstream 4051 true Scaffold18473: 207537-211587 Boechera stricta
Bostr.18473s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold18473: 211088-211587 Boechera stricta
Bostr.18473s0038 1.0kb upstream 1.0kb upstream 4551 true Scaffold18473: 206537-211087 Boechera stricta
Bostr.18473s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold18473: 206537-207536 Boechera stricta
Bostr.18473s0038 1.0kb downstream 1.0kb downstream 4551 true Scaffold18473: 207537-212087 Boechera stricta
Bostr.18473s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold18473: 211088-212087 Boechera stricta
Bostr.18473s0038 2.0kb upstream 2.0kb upstream 5551 true Scaffold18473: 205537-211087 Boechera stricta
Bostr.18473s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold18473: 205537-207536 Boechera stricta
Bostr.18473s0038 2.0kb downstream 2.0kb downstream 5551 true Scaffold18473: 207537-213087 Boechera stricta
Bostr.18473s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold18473: 211088-213087 Boechera stricta
Bostr.18473s0038 5.0kb upstream 5.0kb upstream 8551 true Scaffold18473: 202537-211087 Boechera stricta
Bostr.18473s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold18473: 202537-207536 Boechera stricta
Bostr.18473s0038 5.0kb downstream 5.0kb downstream 8551 true Scaffold18473: 207537-216087 Boechera stricta
Bostr.18473s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold18473: 211088-216087 Boechera stricta
Bostr.18473s0038 10.0kb upstream 10.0kb upstream 13551 true Scaffold18473: 197537-211087 Boechera stricta
Bostr.18473s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold18473: 197537-207536 Boechera stricta
Bostr.18473s0038 10.0kb downstream 10.0kb downstream 13551 true Scaffold18473: 207537-221087 Boechera stricta
Bostr.18473s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold18473: 211088-221087 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122341098 5261 Brassicaceae Singleton cluster - no MSA
123781506 5264 Brassicales-Malvales Singleton cluster - no MSA
124279792 5266 SBM Singleton cluster - no MSA
124252171 5268 Malvidae View MSA
124071281 5270 Rosid View MSA
123746738 5271 Pentapetalae View MSA
122787767 5272 Eudicot View MSA
122051677 5273 Angiosperm View MSA
121345980 5274 Embryophyte View MSA
123428579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain