Gene : Bostr.18351s0017 B. stricta v1.2
Defline:  (1 of 4) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  17
Name:  ? Bostr.18351s0017 Secondary Identifier:  ? PAC:30676589
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta SER-GLYSYN-PWY Boechera stricta pathologic  
Bstricta SERSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18351s0017 0.5kb upstream 0.5kb upstream 2977 true Scaffold18351: 230167-233143 Boechera stricta
Bostr.18351s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold18351: 230167-230666 Boechera stricta
Bostr.18351s0017 0.5kb downstream 0.5kb downstream 2977 true Scaffold18351: 230667-233643 Boechera stricta
Bostr.18351s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold18351: 233144-233643 Boechera stricta
Bostr.18351s0017 1.0kb upstream 1.0kb upstream 3477 true Scaffold18351: 229667-233143 Boechera stricta
Bostr.18351s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold18351: 229667-230666 Boechera stricta
Bostr.18351s0017 1.0kb downstream 1.0kb downstream 3477 true Scaffold18351: 230667-234143 Boechera stricta
Bostr.18351s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold18351: 233144-234143 Boechera stricta
Bostr.18351s0017 2.0kb upstream 2.0kb upstream 4477 true Scaffold18351: 228667-233143 Boechera stricta
Bostr.18351s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold18351: 228667-230666 Boechera stricta
Bostr.18351s0017 2.0kb downstream 2.0kb downstream 4477 true Scaffold18351: 230667-235143 Boechera stricta
Bostr.18351s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold18351: 233144-235143 Boechera stricta
Bostr.18351s0017 5.0kb upstream 5.0kb upstream 7477 true Scaffold18351: 225667-233143 Boechera stricta
Bostr.18351s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold18351: 225667-230666 Boechera stricta
Bostr.18351s0017 5.0kb downstream 5.0kb downstream 7477 true Scaffold18351: 230667-238143 Boechera stricta
Bostr.18351s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold18351: 233144-238143 Boechera stricta
Bostr.18351s0017 10.0kb upstream 10.0kb upstream 12477 true Scaffold18351: 220667-233143 Boechera stricta
Bostr.18351s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold18351: 220667-230666 Boechera stricta
Bostr.18351s0017 10.0kb downstream 10.0kb downstream 12477 true Scaffold18351: 230667-243143 Boechera stricta
Bostr.18351s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold18351: 233144-243143 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377940 5261 Brassicaceae View MSA
123828170 5264 Brassicales-Malvales View MSA
124344584 5266 SBM View MSA
124245424 5268 Malvidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain