Gene : Bostr.15774s0308 B. stricta v1.2
Defline:  (1 of 3) PTHR11751:SF411 - AMINOTRANSFERASE ACS10-RELATED Genomic Order:  308
Name:  ? Bostr.15774s0308 Secondary Identifier:  ? PAC:30665980
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ASPARTATE-DEG1-PWY Boechera stricta pathologic  
Bstricta ASPARTATESYN-PWY Boechera stricta pathologic  
Bstricta PWY-3001 Boechera stricta pathologic  
Bstricta PWY-7115 Boechera stricta pathologic  
Bstricta PWY-7117 Boechera stricta pathologic  
Bstricta THRESYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15774s0308 0.5kb upstream 0.5kb upstream 2541 true Scaffold15774: 2933290-2935830 Boechera stricta
Bostr.15774s0308 0.5kb upstream 0.5kb upstream 500 false Scaffold15774: 2935331-2935830 Boechera stricta
Bostr.15774s0308 0.5kb downstream 0.5kb downstream 2541 true Scaffold15774: 2932790-2935330 Boechera stricta
Bostr.15774s0308 0.5kb downstream 0.5kb downstream 500 false Scaffold15774: 2932790-2933289 Boechera stricta
Bostr.15774s0308 1.0kb upstream 1.0kb upstream 3041 true Scaffold15774: 2933290-2936330 Boechera stricta
Bostr.15774s0308 1.0kb upstream 1.0kb upstream 1000 false Scaffold15774: 2935331-2936330 Boechera stricta
Bostr.15774s0308 1.0kb downstream 1.0kb downstream 3041 true Scaffold15774: 2932290-2935330 Boechera stricta
Bostr.15774s0308 1.0kb downstream 1.0kb downstream 1000 false Scaffold15774: 2932290-2933289 Boechera stricta
Bostr.15774s0308 2.0kb upstream 2.0kb upstream 4041 true Scaffold15774: 2933290-2937330 Boechera stricta
Bostr.15774s0308 2.0kb upstream 2.0kb upstream 2000 false Scaffold15774: 2935331-2937330 Boechera stricta
Bostr.15774s0308 2.0kb downstream 2.0kb downstream 4041 true Scaffold15774: 2931290-2935330 Boechera stricta
Bostr.15774s0308 2.0kb downstream 2.0kb downstream 2000 false Scaffold15774: 2931290-2933289 Boechera stricta
Bostr.15774s0308 5.0kb upstream 5.0kb upstream 7041 true Scaffold15774: 2933290-2940330 Boechera stricta
Bostr.15774s0308 5.0kb upstream 5.0kb upstream 5000 false Scaffold15774: 2935331-2940330 Boechera stricta
Bostr.15774s0308 5.0kb downstream 5.0kb downstream 7041 true Scaffold15774: 2928290-2935330 Boechera stricta
Bostr.15774s0308 5.0kb downstream 5.0kb downstream 5000 false Scaffold15774: 2928290-2933289 Boechera stricta
Bostr.15774s0308 10.0kb upstream 10.0kb upstream 12041 true Scaffold15774: 2933290-2945330 Boechera stricta
Bostr.15774s0308 10.0kb upstream 10.0kb upstream 10000 false Scaffold15774: 2935331-2945330 Boechera stricta
Bostr.15774s0308 10.0kb downstream 10.0kb downstream 12041 true Scaffold15774: 2923290-2935330 Boechera stricta
Bostr.15774s0308 10.0kb downstream 10.0kb downstream 10000 false Scaffold15774: 2923290-2933289 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366530 5261 Brassicaceae View MSA
123829880 5264 Brassicales-Malvales View MSA
124338348 5266 SBM View MSA
124236986 5268 Malvidae View MSA
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain