Gene : Bostr.19424s0275 B. stricta v1.2

Defline:  (1 of 1) PTHR22762:SF7 - ALPHA GLUCOSIDASE-LIKE PROTEIN Genomic Order:  275
Name:  ? Bostr.19424s0275 Secondary Identifier:  ? PAC:30661625

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0275 0.5kb upstream 0.5kb upstream 8836 true Scaffold19424: 2554475-2563310 Boechera stricta
Bostr.19424s0275 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 2562811-2563310 Boechera stricta
Bostr.19424s0275 0.5kb downstream 0.5kb downstream 8836 true Scaffold19424: 2553975-2562810 Boechera stricta
Bostr.19424s0275 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 2553975-2554474 Boechera stricta
Bostr.19424s0275 1.0kb upstream 1.0kb upstream 9336 true Scaffold19424: 2554475-2563810 Boechera stricta
Bostr.19424s0275 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 2562811-2563810 Boechera stricta
Bostr.19424s0275 1.0kb downstream 1.0kb downstream 9336 true Scaffold19424: 2553475-2562810 Boechera stricta
Bostr.19424s0275 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 2553475-2554474 Boechera stricta
Bostr.19424s0275 2.0kb upstream 2.0kb upstream 10336 true Scaffold19424: 2554475-2564810 Boechera stricta
Bostr.19424s0275 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 2562811-2564810 Boechera stricta
Bostr.19424s0275 2.0kb downstream 2.0kb downstream 10336 true Scaffold19424: 2552475-2562810 Boechera stricta
Bostr.19424s0275 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 2552475-2554474 Boechera stricta
Bostr.19424s0275 5.0kb upstream 5.0kb upstream 13336 true Scaffold19424: 2554475-2567810 Boechera stricta
Bostr.19424s0275 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 2562811-2567810 Boechera stricta
Bostr.19424s0275 5.0kb downstream 5.0kb downstream 13336 true Scaffold19424: 2549475-2562810 Boechera stricta
Bostr.19424s0275 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 2549475-2554474 Boechera stricta
Bostr.19424s0275 10.0kb upstream 10.0kb upstream 18336 true Scaffold19424: 2554475-2572810 Boechera stricta
Bostr.19424s0275 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 2562811-2572810 Boechera stricta
Bostr.19424s0275 10.0kb downstream 10.0kb downstream 18336 true Scaffold19424: 2544475-2562810 Boechera stricta
Bostr.19424s0275 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 2544475-2554474 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360936 5261 Brassicaceae View MSA
123831939 5264 Brassicales-Malvales View MSA
124345782 5266 SBM View MSA
124236856 5268 Malvidae View MSA
124066152 5270 Rosid View MSA
123740745 5271 Pentapetalae View MSA
122786670 5272 Eudicot View MSA
122042416 5273 Angiosperm View MSA
121343930 5274 Embryophyte View MSA
123379942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain