Gene : Bostr.9345s0046 B. stricta v1.2
Defline:  (1 of 3) PTHR15245:SF23 - PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1-RELATED Genomic Order:  46
Name:  ? Bostr.9345s0046 Secondary Identifier:  ? PAC:30667228
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6351 Boechera stricta pathologic  
Bstricta PWY-6352 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.9345s0046 0.5kb upstream 0.5kb upstream 2174 true Scaffold9345: 254636-256809 Boechera stricta
Bostr.9345s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold9345: 256310-256809 Boechera stricta
Bostr.9345s0046 0.5kb downstream 0.5kb downstream 2174 true Scaffold9345: 254136-256309 Boechera stricta
Bostr.9345s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold9345: 254136-254635 Boechera stricta
Bostr.9345s0046 1.0kb upstream 1.0kb upstream 2674 true Scaffold9345: 254636-257309 Boechera stricta
Bostr.9345s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold9345: 256310-257309 Boechera stricta
Bostr.9345s0046 1.0kb downstream 1.0kb downstream 2674 true Scaffold9345: 253636-256309 Boechera stricta
Bostr.9345s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold9345: 253636-254635 Boechera stricta
Bostr.9345s0046 2.0kb upstream 2.0kb upstream 3674 true Scaffold9345: 254636-258309 Boechera stricta
Bostr.9345s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold9345: 256310-258309 Boechera stricta
Bostr.9345s0046 2.0kb downstream 2.0kb downstream 3674 true Scaffold9345: 252636-256309 Boechera stricta
Bostr.9345s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold9345: 252636-254635 Boechera stricta
Bostr.9345s0046 5.0kb upstream 5.0kb upstream 6674 true Scaffold9345: 254636-261309 Boechera stricta
Bostr.9345s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold9345: 256310-261309 Boechera stricta
Bostr.9345s0046 5.0kb downstream 5.0kb downstream 6674 true Scaffold9345: 249636-256309 Boechera stricta
Bostr.9345s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold9345: 249636-254635 Boechera stricta
Bostr.9345s0046 10.0kb upstream 10.0kb upstream 11674 true Scaffold9345: 254636-266309 Boechera stricta
Bostr.9345s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold9345: 256310-266309 Boechera stricta
Bostr.9345s0046 10.0kb downstream 10.0kb downstream 11674 true Scaffold9345: 244636-256309 Boechera stricta
Bostr.9345s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold9345: 244636-254635 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028211 5273 Angiosperm View MSA
122360464 5261 Brassicaceae View MSA
123835009 5264 Brassicales-Malvales View MSA
124350299 5266 SBM View MSA
124236907 5268 Malvidae View MSA
124066276 5270 Rosid View MSA
123740399 5271 Pentapetalae View MSA
122769978 5272 Eudicot View MSA
123429040 5275 Viridiplantae View MSA
121297732 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain