Gene : Bostr.19046s0069 B. stricta v1.2
Defline:  (1 of 2) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Genomic Order:  69
Name:  ? Bostr.19046s0069 Secondary Identifier:  ? PAC:30653678
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta LIPASYN-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19046s0069 0.5kb upstream 0.5kb upstream 2740 true Scaffold19046: 283101-285840 Boechera stricta
Bostr.19046s0069 0.5kb upstream 0.5kb upstream 500 false Scaffold19046: 285341-285840 Boechera stricta
Bostr.19046s0069 0.5kb downstream 0.5kb downstream 2740 true Scaffold19046: 282601-285340 Boechera stricta
Bostr.19046s0069 0.5kb downstream 0.5kb downstream 500 false Scaffold19046: 282601-283100 Boechera stricta
Bostr.19046s0069 1.0kb upstream 1.0kb upstream 3240 true Scaffold19046: 283101-286340 Boechera stricta
Bostr.19046s0069 1.0kb upstream 1.0kb upstream 1000 false Scaffold19046: 285341-286340 Boechera stricta
Bostr.19046s0069 1.0kb downstream 1.0kb downstream 3240 true Scaffold19046: 282101-285340 Boechera stricta
Bostr.19046s0069 1.0kb downstream 1.0kb downstream 1000 false Scaffold19046: 282101-283100 Boechera stricta
Bostr.19046s0069 2.0kb upstream 2.0kb upstream 4240 true Scaffold19046: 283101-287340 Boechera stricta
Bostr.19046s0069 2.0kb upstream 2.0kb upstream 2000 false Scaffold19046: 285341-287340 Boechera stricta
Bostr.19046s0069 2.0kb downstream 2.0kb downstream 4240 true Scaffold19046: 281101-285340 Boechera stricta
Bostr.19046s0069 2.0kb downstream 2.0kb downstream 2000 false Scaffold19046: 281101-283100 Boechera stricta
Bostr.19046s0069 5.0kb upstream 5.0kb upstream 7240 true Scaffold19046: 283101-290340 Boechera stricta
Bostr.19046s0069 5.0kb upstream 5.0kb upstream 5000 false Scaffold19046: 285341-290340 Boechera stricta
Bostr.19046s0069 5.0kb downstream 5.0kb downstream 7240 true Scaffold19046: 278101-285340 Boechera stricta
Bostr.19046s0069 5.0kb downstream 5.0kb downstream 5000 false Scaffold19046: 278101-283100 Boechera stricta
Bostr.19046s0069 10.0kb upstream 10.0kb upstream 12240 true Scaffold19046: 283101-295340 Boechera stricta
Bostr.19046s0069 10.0kb upstream 10.0kb upstream 10000 false Scaffold19046: 285341-295340 Boechera stricta
Bostr.19046s0069 10.0kb downstream 10.0kb downstream 12240 true Scaffold19046: 273101-285340 Boechera stricta
Bostr.19046s0069 10.0kb downstream 10.0kb downstream 10000 false Scaffold19046: 273101-283100 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365377 5261 Brassicaceae View MSA
123831528 5264 Brassicales-Malvales View MSA
124345260 5266 SBM View MSA
124244843 5268 Malvidae View MSA
124067828 5270 Rosid View MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain