Gene : Bostr.18473s0219 B. stricta v1.2
Defline:  (1 of 1) PTHR11540:SF14 - MALATE DEHYDROGENASE, CHLOROPLASTIC Genomic Order:  219
Name:  ? Bostr.18473s0219 Secondary Identifier:  ? PAC:30666877
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLUCONEO-PWY Boechera stricta pathologic  
Bstricta GLYOXYLATE-BYPASS Boechera stricta pathologic  
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  
Bstricta PWY-5690 Boechera stricta pathologic  
Bstricta PWY66-399 Boechera stricta pathologic  
Bstricta PWY-7115 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18473s0219 0.5kb upstream 0.5kb upstream 2507 true Scaffold18473: 1237952-1240458 Boechera stricta
Bostr.18473s0219 0.5kb upstream 0.5kb upstream 500 false Scaffold18473: 1239959-1240458 Boechera stricta
Bostr.18473s0219 0.5kb downstream 0.5kb downstream 2507 true Scaffold18473: 1237452-1239958 Boechera stricta
Bostr.18473s0219 0.5kb downstream 0.5kb downstream 500 false Scaffold18473: 1237452-1237951 Boechera stricta
Bostr.18473s0219 1.0kb upstream 1.0kb upstream 3007 true Scaffold18473: 1237952-1240958 Boechera stricta
Bostr.18473s0219 1.0kb upstream 1.0kb upstream 1000 false Scaffold18473: 1239959-1240958 Boechera stricta
Bostr.18473s0219 1.0kb downstream 1.0kb downstream 3007 true Scaffold18473: 1236952-1239958 Boechera stricta
Bostr.18473s0219 1.0kb downstream 1.0kb downstream 1000 false Scaffold18473: 1236952-1237951 Boechera stricta
Bostr.18473s0219 2.0kb upstream 2.0kb upstream 4007 true Scaffold18473: 1237952-1241958 Boechera stricta
Bostr.18473s0219 2.0kb upstream 2.0kb upstream 2000 false Scaffold18473: 1239959-1241958 Boechera stricta
Bostr.18473s0219 2.0kb downstream 2.0kb downstream 4007 true Scaffold18473: 1235952-1239958 Boechera stricta
Bostr.18473s0219 2.0kb downstream 2.0kb downstream 2000 false Scaffold18473: 1235952-1237951 Boechera stricta
Bostr.18473s0219 5.0kb upstream 5.0kb upstream 7007 true Scaffold18473: 1237952-1244958 Boechera stricta
Bostr.18473s0219 5.0kb upstream 5.0kb upstream 5000 false Scaffold18473: 1239959-1244958 Boechera stricta
Bostr.18473s0219 5.0kb downstream 5.0kb downstream 7007 true Scaffold18473: 1232952-1239958 Boechera stricta
Bostr.18473s0219 5.0kb downstream 5.0kb downstream 5000 false Scaffold18473: 1232952-1237951 Boechera stricta
Bostr.18473s0219 10.0kb upstream 10.0kb upstream 12007 true Scaffold18473: 1237952-1249958 Boechera stricta
Bostr.18473s0219 10.0kb upstream 10.0kb upstream 10000 false Scaffold18473: 1239959-1249958 Boechera stricta
Bostr.18473s0219 10.0kb downstream 10.0kb downstream 12007 true Scaffold18473: 1227952-1239958 Boechera stricta
Bostr.18473s0219 10.0kb downstream 10.0kb downstream 10000 false Scaffold18473: 1227952-1237951 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367755 5261 Brassicaceae View MSA
123838139 5264 Brassicales-Malvales View MSA
124343979 5266 SBM View MSA
124242231 5268 Malvidae View MSA
124067628 5270 Rosid View MSA
123748297 5271 Pentapetalae View MSA
122785823 5272 Eudicot View MSA
122049358 5273 Angiosperm View MSA
121344647 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain