Gene : Bostr.19424s0623 B. stricta v1.2
Defline:  (1 of 1) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  623
Name:  ? Bostr.19424s0623 Secondary Identifier:  ? PAC:30661827
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY0-162 Boechera stricta pathologic  
Bstricta PWY-5686 Boechera stricta pathologic  
Bstricta PWY-7211 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0623 0.5kb upstream 0.5kb upstream 2948 true Scaffold19424: 4955620-4958567 Boechera stricta
Bostr.19424s0623 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 4955620-4956119 Boechera stricta
Bostr.19424s0623 0.5kb downstream 0.5kb downstream 2948 true Scaffold19424: 4956120-4959067 Boechera stricta
Bostr.19424s0623 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 4958568-4959067 Boechera stricta
Bostr.19424s0623 1.0kb upstream 1.0kb upstream 3448 true Scaffold19424: 4955120-4958567 Boechera stricta
Bostr.19424s0623 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 4955120-4956119 Boechera stricta
Bostr.19424s0623 1.0kb downstream 1.0kb downstream 3448 true Scaffold19424: 4956120-4959567 Boechera stricta
Bostr.19424s0623 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 4958568-4959567 Boechera stricta
Bostr.19424s0623 2.0kb upstream 2.0kb upstream 4448 true Scaffold19424: 4954120-4958567 Boechera stricta
Bostr.19424s0623 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 4954120-4956119 Boechera stricta
Bostr.19424s0623 2.0kb downstream 2.0kb downstream 4448 true Scaffold19424: 4956120-4960567 Boechera stricta
Bostr.19424s0623 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 4958568-4960567 Boechera stricta
Bostr.19424s0623 5.0kb upstream 5.0kb upstream 7448 true Scaffold19424: 4951120-4958567 Boechera stricta
Bostr.19424s0623 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 4951120-4956119 Boechera stricta
Bostr.19424s0623 5.0kb downstream 5.0kb downstream 7448 true Scaffold19424: 4956120-4963567 Boechera stricta
Bostr.19424s0623 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 4958568-4963567 Boechera stricta
Bostr.19424s0623 10.0kb upstream 10.0kb upstream 12448 true Scaffold19424: 4946120-4958567 Boechera stricta
Bostr.19424s0623 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 4946120-4956119 Boechera stricta
Bostr.19424s0623 10.0kb downstream 10.0kb downstream 12448 true Scaffold19424: 4956120-4968567 Boechera stricta
Bostr.19424s0623 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 4958568-4968567 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361849 5261 Brassicaceae View MSA
123834078 5264 Brassicales-Malvales View MSA
124341674 5266 SBM View MSA
124240648 5268 Malvidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain