Gene : Bostr.20129s0332 B. stricta v1.2
Defline:  (1 of 1) 5.4.99.38//5.4.99.39//5.4.99.40 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase // Alpha-amyrin synthase / 2,3-oxidosqualene alpha-amyrin cyclase Genomic Order:  332
Name:  ? Bostr.20129s0332 Secondary Identifier:  ? PAC:30673986
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5377 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0332 0.5kb upstream 0.5kb upstream 11436 true Scaffold20129: 1853039-1864474 Boechera stricta
Bostr.20129s0332 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 1863975-1864474 Boechera stricta
Bostr.20129s0332 0.5kb downstream 0.5kb downstream 11436 true Scaffold20129: 1852539-1863974 Boechera stricta
Bostr.20129s0332 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 1852539-1853038 Boechera stricta
Bostr.20129s0332 1.0kb upstream 1.0kb upstream 11936 true Scaffold20129: 1853039-1864974 Boechera stricta
Bostr.20129s0332 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 1863975-1864974 Boechera stricta
Bostr.20129s0332 1.0kb downstream 1.0kb downstream 11936 true Scaffold20129: 1852039-1863974 Boechera stricta
Bostr.20129s0332 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 1852039-1853038 Boechera stricta
Bostr.20129s0332 2.0kb upstream 2.0kb upstream 12936 true Scaffold20129: 1853039-1865974 Boechera stricta
Bostr.20129s0332 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 1863975-1865974 Boechera stricta
Bostr.20129s0332 2.0kb downstream 2.0kb downstream 12936 true Scaffold20129: 1851039-1863974 Boechera stricta
Bostr.20129s0332 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 1851039-1853038 Boechera stricta
Bostr.20129s0332 5.0kb upstream 5.0kb upstream 15936 true Scaffold20129: 1853039-1868974 Boechera stricta
Bostr.20129s0332 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 1863975-1868974 Boechera stricta
Bostr.20129s0332 5.0kb downstream 5.0kb downstream 15936 true Scaffold20129: 1848039-1863974 Boechera stricta
Bostr.20129s0332 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 1848039-1853038 Boechera stricta
Bostr.20129s0332 10.0kb upstream 10.0kb upstream 20936 true Scaffold20129: 1853039-1873974 Boechera stricta
Bostr.20129s0332 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 1863975-1873974 Boechera stricta
Bostr.20129s0332 10.0kb downstream 10.0kb downstream 20936 true Scaffold20129: 1843039-1863974 Boechera stricta
Bostr.20129s0332 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 1843039-1853038 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
122364472 5261 Brassicaceae View MSA
123837659 5264 Brassicales-Malvales View MSA
124341185 5266 SBM View MSA
124240191 5268 Malvidae View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain