Gene : Bostr.20129s0338 B. stricta v1.2
Defline:  (1 of 2) PTHR10849 - NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL Genomic Order:  338
Name:  ? Bostr.20129s0338 Secondary Identifier:  ? PAC:30674190
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3781 Boechera stricta pathologic  
Bstricta PWY-4302 Boechera stricta pathologic  
Bstricta PWY-5083 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0338 0.5kb upstream 0.5kb upstream 2814 true Scaffold20129: 1896935-1899748 Boechera stricta
Bostr.20129s0338 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 1899249-1899748 Boechera stricta
Bostr.20129s0338 0.5kb downstream 0.5kb downstream 2814 true Scaffold20129: 1896435-1899248 Boechera stricta
Bostr.20129s0338 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 1896435-1896934 Boechera stricta
Bostr.20129s0338 1.0kb upstream 1.0kb upstream 3314 true Scaffold20129: 1896935-1900248 Boechera stricta
Bostr.20129s0338 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 1899249-1900248 Boechera stricta
Bostr.20129s0338 1.0kb downstream 1.0kb downstream 3314 true Scaffold20129: 1895935-1899248 Boechera stricta
Bostr.20129s0338 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 1895935-1896934 Boechera stricta
Bostr.20129s0338 2.0kb upstream 2.0kb upstream 4314 true Scaffold20129: 1896935-1901248 Boechera stricta
Bostr.20129s0338 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 1899249-1901248 Boechera stricta
Bostr.20129s0338 2.0kb downstream 2.0kb downstream 4314 true Scaffold20129: 1894935-1899248 Boechera stricta
Bostr.20129s0338 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 1894935-1896934 Boechera stricta
Bostr.20129s0338 5.0kb upstream 5.0kb upstream 7314 true Scaffold20129: 1896935-1904248 Boechera stricta
Bostr.20129s0338 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 1899249-1904248 Boechera stricta
Bostr.20129s0338 5.0kb downstream 5.0kb downstream 7314 true Scaffold20129: 1891935-1899248 Boechera stricta
Bostr.20129s0338 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 1891935-1896934 Boechera stricta
Bostr.20129s0338 10.0kb upstream 10.0kb upstream 12314 true Scaffold20129: 1896935-1909248 Boechera stricta
Bostr.20129s0338 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 1899249-1909248 Boechera stricta
Bostr.20129s0338 10.0kb downstream 10.0kb downstream 12314 true Scaffold20129: 1886935-1899248 Boechera stricta
Bostr.20129s0338 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 1886935-1896934 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371160 5261 Brassicaceae View MSA
123838617 5264 Brassicales-Malvales View MSA
124351527 5266 SBM View MSA
124241017 5268 Malvidae View MSA
124064597 5270 Rosid View MSA
123744244 5271 Pentapetalae View MSA
122789231 5272 Eudicot View MSA
122050387 5273 Angiosperm View MSA
121349210 5274 Embryophyte View MSA
123424843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain