Gene : Bostr.20129s0139 B. stricta v1.2
Defline:  (1 of 182) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  139
Name:  ? Bostr.20129s0139 Secondary Identifier:  ? PAC:30673877
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0139 0.5kb upstream 0.5kb upstream 3201 true Scaffold20129: 789750-792950 Boechera stricta
Bostr.20129s0139 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 789750-790249 Boechera stricta
Bostr.20129s0139 0.5kb downstream 0.5kb downstream 3201 true Scaffold20129: 790250-793450 Boechera stricta
Bostr.20129s0139 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 792951-793450 Boechera stricta
Bostr.20129s0139 1.0kb upstream 1.0kb upstream 3701 true Scaffold20129: 789250-792950 Boechera stricta
Bostr.20129s0139 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 789250-790249 Boechera stricta
Bostr.20129s0139 1.0kb downstream 1.0kb downstream 3701 true Scaffold20129: 790250-793950 Boechera stricta
Bostr.20129s0139 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 792951-793950 Boechera stricta
Bostr.20129s0139 2.0kb upstream 2.0kb upstream 4701 true Scaffold20129: 788250-792950 Boechera stricta
Bostr.20129s0139 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 788250-790249 Boechera stricta
Bostr.20129s0139 2.0kb downstream 2.0kb downstream 4701 true Scaffold20129: 790250-794950 Boechera stricta
Bostr.20129s0139 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 792951-794950 Boechera stricta
Bostr.20129s0139 5.0kb upstream 5.0kb upstream 7701 true Scaffold20129: 785250-792950 Boechera stricta
Bostr.20129s0139 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 785250-790249 Boechera stricta
Bostr.20129s0139 5.0kb downstream 5.0kb downstream 7701 true Scaffold20129: 790250-797950 Boechera stricta
Bostr.20129s0139 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 792951-797950 Boechera stricta
Bostr.20129s0139 10.0kb upstream 10.0kb upstream 12701 true Scaffold20129: 780250-792950 Boechera stricta
Bostr.20129s0139 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 780250-790249 Boechera stricta
Bostr.20129s0139 10.0kb downstream 10.0kb downstream 12701 true Scaffold20129: 790250-802950 Boechera stricta
Bostr.20129s0139 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 792951-802950 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369713 5261 Brassicaceae View MSA
123830889 5264 Brassicales-Malvales View MSA
124344267 5266 SBM View MSA
124237982 5268 Malvidae View MSA
124061594 5270 Rosid View MSA
123740286 5271 Pentapetalae View MSA
122790311 5272 Eudicot View MSA
122046629 5273 Angiosperm View MSA
121310635 5274 Embryophyte View MSA
123348067 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain