Gene : Bostr.20129s0039 B. stricta v1.2
Defline:  (1 of 1) PTHR11079:SF73 - RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTIC Genomic Order:  39
Name:  ? Bostr.20129s0039 Secondary Identifier:  ? PAC:30673848
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0039 0.5kb upstream 0.5kb upstream 2900 true Scaffold20129: 223846-226745 Boechera stricta
Bostr.20129s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 223846-224345 Boechera stricta
Bostr.20129s0039 0.5kb downstream 0.5kb downstream 2900 true Scaffold20129: 224346-227245 Boechera stricta
Bostr.20129s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 226746-227245 Boechera stricta
Bostr.20129s0039 1.0kb upstream 1.0kb upstream 3400 true Scaffold20129: 223346-226745 Boechera stricta
Bostr.20129s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 223346-224345 Boechera stricta
Bostr.20129s0039 1.0kb downstream 1.0kb downstream 3400 true Scaffold20129: 224346-227745 Boechera stricta
Bostr.20129s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 226746-227745 Boechera stricta
Bostr.20129s0039 2.0kb upstream 2.0kb upstream 4400 true Scaffold20129: 222346-226745 Boechera stricta
Bostr.20129s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 222346-224345 Boechera stricta
Bostr.20129s0039 2.0kb downstream 2.0kb downstream 4400 true Scaffold20129: 224346-228745 Boechera stricta
Bostr.20129s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 226746-228745 Boechera stricta
Bostr.20129s0039 5.0kb upstream 5.0kb upstream 7400 true Scaffold20129: 219346-226745 Boechera stricta
Bostr.20129s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 219346-224345 Boechera stricta
Bostr.20129s0039 5.0kb downstream 5.0kb downstream 7400 true Scaffold20129: 224346-231745 Boechera stricta
Bostr.20129s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 226746-231745 Boechera stricta
Bostr.20129s0039 10.0kb upstream 10.0kb upstream 12400 true Scaffold20129: 214346-226745 Boechera stricta
Bostr.20129s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 214346-224345 Boechera stricta
Bostr.20129s0039 10.0kb downstream 10.0kb downstream 12400 true Scaffold20129: 224346-236745 Boechera stricta
Bostr.20129s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 226746-236745 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366345 5261 Brassicaceae View MSA
123827875 5264 Brassicales-Malvales View MSA
124340786 5266 SBM View MSA
124242022 5268 Malvidae View MSA
124067698 5270 Rosid View MSA
123740494 5271 Pentapetalae View MSA
122788913 5272 Eudicot View MSA
122047561 5273 Angiosperm View MSA
121344474 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain