Gene : Bostr.20055s0039 B. stricta v1.2
Defline:  (1 of 1) 4.1.1.20 - Diaminopimelate decarboxylase / Meso-2,6-diaminoheptanedioate carboxy-lyase Genomic Order:  39
Name:  ? Bostr.20055s0039 Secondary Identifier:  ? PAC:30677458
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5097 Boechera stricta pathologic  
Bstricta PWY-724 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20055s0039 0.5kb upstream 0.5kb upstream 3080 true Scaffold20055: 168235-171314 Boechera stricta
Bostr.20055s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold20055: 168235-168734 Boechera stricta
Bostr.20055s0039 0.5kb downstream 0.5kb downstream 3080 true Scaffold20055: 168735-171814 Boechera stricta
Bostr.20055s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold20055: 171315-171814 Boechera stricta
Bostr.20055s0039 1.0kb upstream 1.0kb upstream 3580 true Scaffold20055: 167735-171314 Boechera stricta
Bostr.20055s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold20055: 167735-168734 Boechera stricta
Bostr.20055s0039 1.0kb downstream 1.0kb downstream 3580 true Scaffold20055: 168735-172314 Boechera stricta
Bostr.20055s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold20055: 171315-172314 Boechera stricta
Bostr.20055s0039 2.0kb upstream 2.0kb upstream 4580 true Scaffold20055: 166735-171314 Boechera stricta
Bostr.20055s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold20055: 166735-168734 Boechera stricta
Bostr.20055s0039 2.0kb downstream 2.0kb downstream 4580 true Scaffold20055: 168735-173314 Boechera stricta
Bostr.20055s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold20055: 171315-173314 Boechera stricta
Bostr.20055s0039 5.0kb upstream 5.0kb upstream 7580 true Scaffold20055: 163735-171314 Boechera stricta
Bostr.20055s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold20055: 163735-168734 Boechera stricta
Bostr.20055s0039 5.0kb downstream 5.0kb downstream 7580 true Scaffold20055: 168735-176314 Boechera stricta
Bostr.20055s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold20055: 171315-176314 Boechera stricta
Bostr.20055s0039 10.0kb upstream 10.0kb upstream 12580 true Scaffold20055: 158735-171314 Boechera stricta
Bostr.20055s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold20055: 158735-168734 Boechera stricta
Bostr.20055s0039 10.0kb downstream 10.0kb downstream 12580 true Scaffold20055: 168735-181314 Boechera stricta
Bostr.20055s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold20055: 171315-181314 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377657 5261 Brassicaceae View MSA
123841462 5264 Brassicales-Malvales View MSA
124337243 5266 SBM View MSA
124250091 5268 Malvidae View MSA
124070276 5270 Rosid View MSA
123742733 5271 Pentapetalae View MSA
122796086 5272 Eudicot View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain