Gene : Bostr.22157s0116 B. stricta v1.2

Defline:  (1 of 10) KOG0987 - DNA helicase PIF1/RRM3 Genomic Order:  116
Name:  ? Bostr.22157s0116 Secondary Identifier:  ? PAC:30653862

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22157s0116 0.5kb upstream 0.5kb upstream 6486 true Scaffold22157: 817480-823965 Boechera stricta
Bostr.22157s0116 0.5kb upstream 0.5kb upstream 500 false Scaffold22157: 817480-817979 Boechera stricta
Bostr.22157s0116 0.5kb downstream 0.5kb downstream 6486 true Scaffold22157: 817980-824465 Boechera stricta
Bostr.22157s0116 0.5kb downstream 0.5kb downstream 500 false Scaffold22157: 823966-824465 Boechera stricta
Bostr.22157s0116 1.0kb upstream 1.0kb upstream 6986 true Scaffold22157: 816980-823965 Boechera stricta
Bostr.22157s0116 1.0kb upstream 1.0kb upstream 1000 false Scaffold22157: 816980-817979 Boechera stricta
Bostr.22157s0116 1.0kb downstream 1.0kb downstream 6986 true Scaffold22157: 817980-824965 Boechera stricta
Bostr.22157s0116 1.0kb downstream 1.0kb downstream 1000 false Scaffold22157: 823966-824965 Boechera stricta
Bostr.22157s0116 2.0kb upstream 2.0kb upstream 7986 true Scaffold22157: 815980-823965 Boechera stricta
Bostr.22157s0116 2.0kb upstream 2.0kb upstream 2000 false Scaffold22157: 815980-817979 Boechera stricta
Bostr.22157s0116 2.0kb downstream 2.0kb downstream 7986 true Scaffold22157: 817980-825965 Boechera stricta
Bostr.22157s0116 2.0kb downstream 2.0kb downstream 2000 false Scaffold22157: 823966-825965 Boechera stricta
Bostr.22157s0116 5.0kb upstream 5.0kb upstream 10986 true Scaffold22157: 812980-823965 Boechera stricta
Bostr.22157s0116 5.0kb upstream 5.0kb upstream 5000 false Scaffold22157: 812980-817979 Boechera stricta
Bostr.22157s0116 5.0kb downstream 5.0kb downstream 10986 true Scaffold22157: 817980-828965 Boechera stricta
Bostr.22157s0116 5.0kb downstream 5.0kb downstream 5000 false Scaffold22157: 823966-828965 Boechera stricta
Bostr.22157s0116 10.0kb upstream 10.0kb upstream 15986 true Scaffold22157: 807980-823965 Boechera stricta
Bostr.22157s0116 10.0kb upstream 10.0kb upstream 10000 false Scaffold22157: 807980-817979 Boechera stricta
Bostr.22157s0116 10.0kb downstream 10.0kb downstream 15986 true Scaffold22157: 817980-833965 Boechera stricta
Bostr.22157s0116 10.0kb downstream 10.0kb downstream 10000 false Scaffold22157: 823966-833965 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122380204 5261 Brassicaceae View MSA
123802598 5264 Brassicales-Malvales View MSA
124350527 5266 SBM View MSA
124252774 5268 Malvidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain