Gene : Bostr.20903s0084 B. stricta v1.2
Defline:  (1 of 36) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  84
Name:  ? Bostr.20903s0084 Secondary Identifier:  ? PAC:30668907
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20903s0084 0.5kb upstream 0.5kb upstream 2585 true Scaffold20903: 402378-404962 Boechera stricta
Bostr.20903s0084 0.5kb upstream 0.5kb upstream 500 false Scaffold20903: 404463-404962 Boechera stricta
Bostr.20903s0084 0.5kb downstream 0.5kb downstream 2585 true Scaffold20903: 401878-404462 Boechera stricta
Bostr.20903s0084 0.5kb downstream 0.5kb downstream 500 false Scaffold20903: 401878-402377 Boechera stricta
Bostr.20903s0084 1.0kb upstream 1.0kb upstream 3085 true Scaffold20903: 402378-405462 Boechera stricta
Bostr.20903s0084 1.0kb upstream 1.0kb upstream 1000 false Scaffold20903: 404463-405462 Boechera stricta
Bostr.20903s0084 1.0kb downstream 1.0kb downstream 3085 true Scaffold20903: 401378-404462 Boechera stricta
Bostr.20903s0084 1.0kb downstream 1.0kb downstream 1000 false Scaffold20903: 401378-402377 Boechera stricta
Bostr.20903s0084 2.0kb upstream 2.0kb upstream 4085 true Scaffold20903: 402378-406462 Boechera stricta
Bostr.20903s0084 2.0kb upstream 2.0kb upstream 2000 false Scaffold20903: 404463-406462 Boechera stricta
Bostr.20903s0084 2.0kb downstream 2.0kb downstream 4085 true Scaffold20903: 400378-404462 Boechera stricta
Bostr.20903s0084 2.0kb downstream 2.0kb downstream 2000 false Scaffold20903: 400378-402377 Boechera stricta
Bostr.20903s0084 5.0kb upstream 5.0kb upstream 7085 true Scaffold20903: 402378-409462 Boechera stricta
Bostr.20903s0084 5.0kb upstream 5.0kb upstream 5000 false Scaffold20903: 404463-409462 Boechera stricta
Bostr.20903s0084 5.0kb downstream 5.0kb downstream 7085 true Scaffold20903: 397378-404462 Boechera stricta
Bostr.20903s0084 5.0kb downstream 5.0kb downstream 5000 false Scaffold20903: 397378-402377 Boechera stricta
Bostr.20903s0084 10.0kb upstream 10.0kb upstream 12085 true Scaffold20903: 402378-414462 Boechera stricta
Bostr.20903s0084 10.0kb upstream 10.0kb upstream 10000 false Scaffold20903: 404463-414462 Boechera stricta
Bostr.20903s0084 10.0kb downstream 10.0kb downstream 12085 true Scaffold20903: 392378-404462 Boechera stricta
Bostr.20903s0084 10.0kb downstream 10.0kb downstream 10000 false Scaffold20903: 392378-402377 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512068 5273 Angiosperm View MSA
122380264 5261 Brassicaceae View MSA
123802629 5264 Brassicales-Malvales View MSA
124299810 5266 SBM View MSA
124151131 5268 Malvidae View MSA
123876632 5270 Rosid View MSA
123460282 5271 Pentapetalae View MSA
122495659 5272 Eudicot View MSA
120785094 5274 Embryophyte View MSA
122826967 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain