Gene : Bostr.20505s0117 B. stricta v1.2
Defline:  (1 of 2) PTHR11404:SF6 - SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL Genomic Order:  117
Name:  ? Bostr.20505s0117 Secondary Identifier:  ? PAC:30674597
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta DETOX1-PWY Boechera stricta pathologic  
Bstricta DETOX1-PWY-1 Boechera stricta pathologic  
Bstricta PWY-6854 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20505s0117 0.5kb upstream 0.5kb upstream 2264 true Scaffold20505: 516824-519087 Boechera stricta
Bostr.20505s0117 0.5kb upstream 0.5kb upstream 500 false Scaffold20505: 516824-517323 Boechera stricta
Bostr.20505s0117 0.5kb downstream 0.5kb downstream 2264 true Scaffold20505: 517324-519587 Boechera stricta
Bostr.20505s0117 0.5kb downstream 0.5kb downstream 500 false Scaffold20505: 519088-519587 Boechera stricta
Bostr.20505s0117 1.0kb upstream 1.0kb upstream 2764 true Scaffold20505: 516324-519087 Boechera stricta
Bostr.20505s0117 1.0kb upstream 1.0kb upstream 1000 false Scaffold20505: 516324-517323 Boechera stricta
Bostr.20505s0117 1.0kb downstream 1.0kb downstream 2764 true Scaffold20505: 517324-520087 Boechera stricta
Bostr.20505s0117 1.0kb downstream 1.0kb downstream 1000 false Scaffold20505: 519088-520087 Boechera stricta
Bostr.20505s0117 2.0kb upstream 2.0kb upstream 3764 true Scaffold20505: 515324-519087 Boechera stricta
Bostr.20505s0117 2.0kb upstream 2.0kb upstream 2000 false Scaffold20505: 515324-517323 Boechera stricta
Bostr.20505s0117 2.0kb downstream 2.0kb downstream 3764 true Scaffold20505: 517324-521087 Boechera stricta
Bostr.20505s0117 2.0kb downstream 2.0kb downstream 2000 false Scaffold20505: 519088-521087 Boechera stricta
Bostr.20505s0117 5.0kb upstream 5.0kb upstream 6764 true Scaffold20505: 512324-519087 Boechera stricta
Bostr.20505s0117 5.0kb upstream 5.0kb upstream 5000 false Scaffold20505: 512324-517323 Boechera stricta
Bostr.20505s0117 5.0kb downstream 5.0kb downstream 6764 true Scaffold20505: 517324-524087 Boechera stricta
Bostr.20505s0117 5.0kb downstream 5.0kb downstream 5000 false Scaffold20505: 519088-524087 Boechera stricta
Bostr.20505s0117 10.0kb upstream 10.0kb upstream 11764 true Scaffold20505: 507324-519087 Boechera stricta
Bostr.20505s0117 10.0kb upstream 10.0kb upstream 10000 false Scaffold20505: 507324-517323 Boechera stricta
Bostr.20505s0117 10.0kb downstream 10.0kb downstream 11764 true Scaffold20505: 517324-529087 Boechera stricta
Bostr.20505s0117 10.0kb downstream 10.0kb downstream 10000 false Scaffold20505: 519088-529087 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510302 5273 Angiosperm View MSA
122361724 5261 Brassicaceae View MSA
123798231 5264 Brassicales-Malvales View MSA
124295900 5266 SBM View MSA
124148209 5268 Malvidae View MSA
123874253 5270 Rosid View MSA
123458256 5271 Pentapetalae View MSA
122493663 5272 Eudicot View MSA
120783407 5274 Embryophyte View MSA
122825421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain