Gene : Bostr.23794s0853 B. stricta v1.2

Defline:  (1 of 1) KOG0227 - Splicing factor 3a, subunit 2 Genomic Order:  853
Name:  ? Bostr.23794s0853 Secondary Identifier:  ? PAC:30650727

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0853 0.5kb upstream 0.5kb upstream 3490 true Scaffold23794: 4749933-4753422 Boechera stricta
Bostr.23794s0853 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 4749933-4750432 Boechera stricta
Bostr.23794s0853 0.5kb downstream 0.5kb downstream 3490 true Scaffold23794: 4750433-4753922 Boechera stricta
Bostr.23794s0853 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 4753423-4753922 Boechera stricta
Bostr.23794s0853 1.0kb upstream 1.0kb upstream 3990 true Scaffold23794: 4749433-4753422 Boechera stricta
Bostr.23794s0853 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 4749433-4750432 Boechera stricta
Bostr.23794s0853 1.0kb downstream 1.0kb downstream 3990 true Scaffold23794: 4750433-4754422 Boechera stricta
Bostr.23794s0853 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 4753423-4754422 Boechera stricta
Bostr.23794s0853 2.0kb upstream 2.0kb upstream 4990 true Scaffold23794: 4748433-4753422 Boechera stricta
Bostr.23794s0853 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 4748433-4750432 Boechera stricta
Bostr.23794s0853 2.0kb downstream 2.0kb downstream 4990 true Scaffold23794: 4750433-4755422 Boechera stricta
Bostr.23794s0853 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 4753423-4755422 Boechera stricta
Bostr.23794s0853 5.0kb upstream 5.0kb upstream 7990 true Scaffold23794: 4745433-4753422 Boechera stricta
Bostr.23794s0853 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 4745433-4750432 Boechera stricta
Bostr.23794s0853 5.0kb downstream 5.0kb downstream 7990 true Scaffold23794: 4750433-4758422 Boechera stricta
Bostr.23794s0853 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 4753423-4758422 Boechera stricta
Bostr.23794s0853 10.0kb upstream 10.0kb upstream 12990 true Scaffold23794: 4740433-4753422 Boechera stricta
Bostr.23794s0853 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 4740433-4750432 Boechera stricta
Bostr.23794s0853 10.0kb downstream 10.0kb downstream 12990 true Scaffold23794: 4750433-4763422 Boechera stricta
Bostr.23794s0853 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 4753423-4763422 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360573 5261 Brassicaceae View MSA
123827588 5264 Brassicales-Malvales View MSA
124345953 5266 SBM View MSA
124243673 5268 Malvidae View MSA
124064225 5270 Rosid View MSA
123745899 5271 Pentapetalae View MSA
122793816 5272 Eudicot View MSA
122043873 5273 Angiosperm View MSA
121344235 5274 Embryophyte View MSA
123425065 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain