Gene : Bostr.25463s0166 B. stricta v1.2
Defline:  (1 of 1) PTHR11592//PTHR11592:SF42 - GLUTATHIONE PEROXIDASE Genomic Order:  166
Name:  ? Bostr.25463s0166 Secondary Identifier:  ? PAC:30679914
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-4081 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25463s0166 0.5kb upstream 0.5kb upstream 2243 true Scaffold25463: 1400678-1402920 Boechera stricta
Bostr.25463s0166 0.5kb upstream 0.5kb upstream 500 false Scaffold25463: 1400678-1401177 Boechera stricta
Bostr.25463s0166 0.5kb downstream 0.5kb downstream 2243 true Scaffold25463: 1401178-1403420 Boechera stricta
Bostr.25463s0166 0.5kb downstream 0.5kb downstream 500 false Scaffold25463: 1402921-1403420 Boechera stricta
Bostr.25463s0166 1.0kb upstream 1.0kb upstream 2743 true Scaffold25463: 1400178-1402920 Boechera stricta
Bostr.25463s0166 1.0kb upstream 1.0kb upstream 1000 false Scaffold25463: 1400178-1401177 Boechera stricta
Bostr.25463s0166 1.0kb downstream 1.0kb downstream 2743 true Scaffold25463: 1401178-1403920 Boechera stricta
Bostr.25463s0166 1.0kb downstream 1.0kb downstream 1000 false Scaffold25463: 1402921-1403920 Boechera stricta
Bostr.25463s0166 2.0kb upstream 2.0kb upstream 3743 true Scaffold25463: 1399178-1402920 Boechera stricta
Bostr.25463s0166 2.0kb upstream 2.0kb upstream 2000 false Scaffold25463: 1399178-1401177 Boechera stricta
Bostr.25463s0166 2.0kb downstream 2.0kb downstream 3743 true Scaffold25463: 1401178-1404920 Boechera stricta
Bostr.25463s0166 2.0kb downstream 2.0kb downstream 2000 false Scaffold25463: 1402921-1404920 Boechera stricta
Bostr.25463s0166 5.0kb upstream 5.0kb upstream 6743 true Scaffold25463: 1396178-1402920 Boechera stricta
Bostr.25463s0166 5.0kb upstream 5.0kb upstream 5000 false Scaffold25463: 1396178-1401177 Boechera stricta
Bostr.25463s0166 5.0kb downstream 5.0kb downstream 6743 true Scaffold25463: 1401178-1407920 Boechera stricta
Bostr.25463s0166 5.0kb downstream 5.0kb downstream 5000 false Scaffold25463: 1402921-1407920 Boechera stricta
Bostr.25463s0166 10.0kb upstream 10.0kb upstream 11743 true Scaffold25463: 1391178-1402920 Boechera stricta
Bostr.25463s0166 10.0kb upstream 10.0kb upstream 10000 false Scaffold25463: 1391178-1401177 Boechera stricta
Bostr.25463s0166 10.0kb downstream 10.0kb downstream 11743 true Scaffold25463: 1401178-1412920 Boechera stricta
Bostr.25463s0166 10.0kb downstream 10.0kb downstream 10000 false Scaffold25463: 1402921-1412920 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365650 5261 Brassicaceae View MSA
123838420 5264 Brassicales-Malvales View MSA
124336450 5266 SBM View MSA
124242823 5268 Malvidae View MSA
124066443 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain