Gene : Bostr.25219s0539 B. stricta v1.2
Defline:  (1 of 2) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase Genomic Order:  539
Name:  ? Bostr.25219s0539 Secondary Identifier:  ? PAC:30671491
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta COA-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0539 0.5kb upstream 0.5kb upstream 2430 true Scaffold25219: 2550679-2553108 Boechera stricta
Bostr.25219s0539 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 2550679-2551178 Boechera stricta
Bostr.25219s0539 0.5kb downstream 0.5kb downstream 2430 true Scaffold25219: 2551179-2553608 Boechera stricta
Bostr.25219s0539 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 2553109-2553608 Boechera stricta
Bostr.25219s0539 1.0kb upstream 1.0kb upstream 2930 true Scaffold25219: 2550179-2553108 Boechera stricta
Bostr.25219s0539 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 2550179-2551178 Boechera stricta
Bostr.25219s0539 1.0kb downstream 1.0kb downstream 2930 true Scaffold25219: 2551179-2554108 Boechera stricta
Bostr.25219s0539 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 2553109-2554108 Boechera stricta
Bostr.25219s0539 2.0kb upstream 2.0kb upstream 3930 true Scaffold25219: 2549179-2553108 Boechera stricta
Bostr.25219s0539 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 2549179-2551178 Boechera stricta
Bostr.25219s0539 2.0kb downstream 2.0kb downstream 3930 true Scaffold25219: 2551179-2555108 Boechera stricta
Bostr.25219s0539 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 2553109-2555108 Boechera stricta
Bostr.25219s0539 5.0kb upstream 5.0kb upstream 6930 true Scaffold25219: 2546179-2553108 Boechera stricta
Bostr.25219s0539 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 2546179-2551178 Boechera stricta
Bostr.25219s0539 5.0kb downstream 5.0kb downstream 6930 true Scaffold25219: 2551179-2558108 Boechera stricta
Bostr.25219s0539 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 2553109-2558108 Boechera stricta
Bostr.25219s0539 10.0kb upstream 10.0kb upstream 11930 true Scaffold25219: 2541179-2553108 Boechera stricta
Bostr.25219s0539 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 2541179-2551178 Boechera stricta
Bostr.25219s0539 10.0kb downstream 10.0kb downstream 11930 true Scaffold25219: 2551179-2563108 Boechera stricta
Bostr.25219s0539 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 2553109-2563108 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343260 5261 Brassicaceae View MSA
123783511 5264 Brassicales-Malvales View MSA
124281740 5266 SBM View MSA
124136448 5268 Malvidae View MSA
123864307 5270 Rosid View MSA
123739959 5271 Pentapetalae View MSA
122787988 5272 Eudicot View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain