Gene : Bostr.25219s0278 B. stricta v1.2
Defline:  (1 of 2) 5.2.1.13 - Prolycopene isomerase / CRTISO Genomic Order:  278
Name:  ? Bostr.25219s0278 Secondary Identifier:  ? PAC:30671442
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta CAROTENOID-PWY Boechera stricta pathologic  
Bstricta PWY-6475 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0278 0.5kb upstream 0.5kb upstream 4131 true Scaffold25219: 1282153-1286283 Boechera stricta
Bostr.25219s0278 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 1282153-1282652 Boechera stricta
Bostr.25219s0278 0.5kb downstream 0.5kb downstream 4131 true Scaffold25219: 1282653-1286783 Boechera stricta
Bostr.25219s0278 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 1286284-1286783 Boechera stricta
Bostr.25219s0278 1.0kb upstream 1.0kb upstream 4631 true Scaffold25219: 1281653-1286283 Boechera stricta
Bostr.25219s0278 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 1281653-1282652 Boechera stricta
Bostr.25219s0278 1.0kb downstream 1.0kb downstream 4631 true Scaffold25219: 1282653-1287283 Boechera stricta
Bostr.25219s0278 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 1286284-1287283 Boechera stricta
Bostr.25219s0278 2.0kb upstream 2.0kb upstream 5631 true Scaffold25219: 1280653-1286283 Boechera stricta
Bostr.25219s0278 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 1280653-1282652 Boechera stricta
Bostr.25219s0278 2.0kb downstream 2.0kb downstream 5631 true Scaffold25219: 1282653-1288283 Boechera stricta
Bostr.25219s0278 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 1286284-1288283 Boechera stricta
Bostr.25219s0278 5.0kb upstream 5.0kb upstream 8631 true Scaffold25219: 1277653-1286283 Boechera stricta
Bostr.25219s0278 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 1277653-1282652 Boechera stricta
Bostr.25219s0278 5.0kb downstream 5.0kb downstream 8631 true Scaffold25219: 1282653-1291283 Boechera stricta
Bostr.25219s0278 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 1286284-1291283 Boechera stricta
Bostr.25219s0278 10.0kb upstream 10.0kb upstream 13631 true Scaffold25219: 1272653-1286283 Boechera stricta
Bostr.25219s0278 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 1272653-1282652 Boechera stricta
Bostr.25219s0278 10.0kb downstream 10.0kb downstream 13631 true Scaffold25219: 1282653-1296283 Boechera stricta
Bostr.25219s0278 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 1286284-1296283 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026345 5273 Angiosperm View MSA
122362908 5261 Brassicaceae View MSA
123831028 5264 Brassicales-Malvales View MSA
124343687 5266 SBM View MSA
124242220 5268 Malvidae View MSA
124064637 5270 Rosid View MSA
123738016 5271 Pentapetalae View MSA
122791420 5272 Eudicot View MSA
121345795 5274 Embryophyte View MSA
123425130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain