Gene : Bostr.25219s0142 B. stricta v1.2

Defline:  (1 of 1) PTHR10799:SF620 - DEFECTIVE CHORION-1 PROTEIN, FC177 ISOFORM Genomic Order:  142
Name:  ? Bostr.25219s0142 Secondary Identifier:  ? PAC:30671909

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0142 0.5kb upstream 0.5kb upstream 10097 true Scaffold25219: 678769-688865 Boechera stricta
Bostr.25219s0142 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 678769-679268 Boechera stricta
Bostr.25219s0142 0.5kb downstream 0.5kb downstream 10097 true Scaffold25219: 679269-689365 Boechera stricta
Bostr.25219s0142 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 688866-689365 Boechera stricta
Bostr.25219s0142 1.0kb upstream 1.0kb upstream 10597 true Scaffold25219: 678269-688865 Boechera stricta
Bostr.25219s0142 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 678269-679268 Boechera stricta
Bostr.25219s0142 1.0kb downstream 1.0kb downstream 10597 true Scaffold25219: 679269-689865 Boechera stricta
Bostr.25219s0142 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 688866-689865 Boechera stricta
Bostr.25219s0142 2.0kb upstream 2.0kb upstream 11597 true Scaffold25219: 677269-688865 Boechera stricta
Bostr.25219s0142 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 677269-679268 Boechera stricta
Bostr.25219s0142 2.0kb downstream 2.0kb downstream 11597 true Scaffold25219: 679269-690865 Boechera stricta
Bostr.25219s0142 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 688866-690865 Boechera stricta
Bostr.25219s0142 5.0kb upstream 5.0kb upstream 14597 true Scaffold25219: 674269-688865 Boechera stricta
Bostr.25219s0142 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 674269-679268 Boechera stricta
Bostr.25219s0142 5.0kb downstream 5.0kb downstream 14597 true Scaffold25219: 679269-693865 Boechera stricta
Bostr.25219s0142 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 688866-693865 Boechera stricta
Bostr.25219s0142 10.0kb upstream 10.0kb upstream 19597 true Scaffold25219: 669269-688865 Boechera stricta
Bostr.25219s0142 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 669269-679268 Boechera stricta
Bostr.25219s0142 10.0kb downstream 10.0kb downstream 19597 true Scaffold25219: 679269-698865 Boechera stricta
Bostr.25219s0142 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 688866-698865 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380505 5261 Brassicaceae View MSA
123838774 5264 Brassicales-Malvales View MSA
124346968 5266 SBM View MSA
124253309 5268 Malvidae View MSA
124069774 5270 Rosid View MSA
123750544 5271 Pentapetalae View MSA
122796032 5272 Eudicot View MSA
122043248 5273 Angiosperm View MSA
121351152 5274 Embryophyte View MSA
123382029 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain