Gene : Bostr.25219s0159 B. stricta v1.2
Defline:  (1 of 2) PTHR31356:SF10 - L-ASCORBATE PEROXIDASE 2, CYTOSOLIC Genomic Order:  159
Name:  ? Bostr.25219s0159 Secondary Identifier:  ? PAC:30671734
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-2261 Boechera stricta pathologic  
Bstricta PWY-6959 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0159 0.5kb upstream 0.5kb upstream 2824 true Scaffold25219: 784146-786969 Boechera stricta
Bostr.25219s0159 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 786470-786969 Boechera stricta
Bostr.25219s0159 0.5kb downstream 0.5kb downstream 2824 true Scaffold25219: 783646-786469 Boechera stricta
Bostr.25219s0159 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 783646-784145 Boechera stricta
Bostr.25219s0159 1.0kb upstream 1.0kb upstream 3324 true Scaffold25219: 784146-787469 Boechera stricta
Bostr.25219s0159 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 786470-787469 Boechera stricta
Bostr.25219s0159 1.0kb downstream 1.0kb downstream 3324 true Scaffold25219: 783146-786469 Boechera stricta
Bostr.25219s0159 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 783146-784145 Boechera stricta
Bostr.25219s0159 2.0kb upstream 2.0kb upstream 4324 true Scaffold25219: 784146-788469 Boechera stricta
Bostr.25219s0159 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 786470-788469 Boechera stricta
Bostr.25219s0159 2.0kb downstream 2.0kb downstream 4324 true Scaffold25219: 782146-786469 Boechera stricta
Bostr.25219s0159 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 782146-784145 Boechera stricta
Bostr.25219s0159 5.0kb upstream 5.0kb upstream 7324 true Scaffold25219: 784146-791469 Boechera stricta
Bostr.25219s0159 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 786470-791469 Boechera stricta
Bostr.25219s0159 5.0kb downstream 5.0kb downstream 7324 true Scaffold25219: 779146-786469 Boechera stricta
Bostr.25219s0159 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 779146-784145 Boechera stricta
Bostr.25219s0159 10.0kb upstream 10.0kb upstream 12324 true Scaffold25219: 784146-796469 Boechera stricta
Bostr.25219s0159 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 786470-796469 Boechera stricta
Bostr.25219s0159 10.0kb downstream 10.0kb downstream 12324 true Scaffold25219: 774146-786469 Boechera stricta
Bostr.25219s0159 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 774146-784145 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365618 5261 Brassicaceae View MSA
123839523 5264 Brassicales-Malvales View MSA
124339715 5266 SBM View MSA
124248895 5268 Malvidae View MSA
124068994 5270 Rosid View MSA
123741454 5271 Pentapetalae View MSA
122796920 5272 Eudicot View MSA
122044564 5273 Angiosperm View MSA
121344996 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain