Gene : Bostr.25993s0122 B. stricta v1.2

Defline:  (1 of 2) PTHR12428//PTHR12428:SF23 - OXA1 Genomic Order:  122
Name:  ? Bostr.25993s0122 Secondary Identifier:  ? PAC:30668028

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0122 0.5kb upstream 0.5kb upstream 3225 true Scaffold25993: 627324-630548 Boechera stricta
Bostr.25993s0122 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 630049-630548 Boechera stricta
Bostr.25993s0122 0.5kb downstream 0.5kb downstream 3225 true Scaffold25993: 626824-630048 Boechera stricta
Bostr.25993s0122 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 626824-627323 Boechera stricta
Bostr.25993s0122 1.0kb upstream 1.0kb upstream 3725 true Scaffold25993: 627324-631048 Boechera stricta
Bostr.25993s0122 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 630049-631048 Boechera stricta
Bostr.25993s0122 1.0kb downstream 1.0kb downstream 3725 true Scaffold25993: 626324-630048 Boechera stricta
Bostr.25993s0122 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 626324-627323 Boechera stricta
Bostr.25993s0122 2.0kb upstream 2.0kb upstream 4725 true Scaffold25993: 627324-632048 Boechera stricta
Bostr.25993s0122 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 630049-632048 Boechera stricta
Bostr.25993s0122 2.0kb downstream 2.0kb downstream 4725 true Scaffold25993: 625324-630048 Boechera stricta
Bostr.25993s0122 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 625324-627323 Boechera stricta
Bostr.25993s0122 5.0kb upstream 5.0kb upstream 7725 true Scaffold25993: 627324-635048 Boechera stricta
Bostr.25993s0122 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 630049-635048 Boechera stricta
Bostr.25993s0122 5.0kb downstream 5.0kb downstream 7725 true Scaffold25993: 622324-630048 Boechera stricta
Bostr.25993s0122 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 622324-627323 Boechera stricta
Bostr.25993s0122 10.0kb upstream 10.0kb upstream 12725 true Scaffold25993: 627324-640048 Boechera stricta
Bostr.25993s0122 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 630049-640048 Boechera stricta
Bostr.25993s0122 10.0kb downstream 10.0kb downstream 12725 true Scaffold25993: 617324-630048 Boechera stricta
Bostr.25993s0122 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 617324-627323 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377585 5261 Brassicaceae View MSA
123801573 5264 Brassicales-Malvales View MSA
124298859 5266 SBM View MSA
124150406 5268 Malvidae View MSA
124065140 5270 Rosid View MSA
123750990 5271 Pentapetalae View MSA
122794726 5272 Eudicot View MSA
122051610 5273 Angiosperm View MSA
121347323 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain