Gene : Bostr.25993s0046 B. stricta v1.2
Defline:  (1 of 1) PTHR11183//PTHR11183:SF54 - GLYCOGENIN Genomic Order:  46
Name:  ? Bostr.25993s0046 Secondary Identifier:  ? PAC:30668024
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5337 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0046 0.5kb upstream 0.5kb upstream 2112 true Scaffold25993: 246289-248400 Boechera stricta
Bostr.25993s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 246289-246788 Boechera stricta
Bostr.25993s0046 0.5kb downstream 0.5kb downstream 2112 true Scaffold25993: 246789-248900 Boechera stricta
Bostr.25993s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 248401-248900 Boechera stricta
Bostr.25993s0046 1.0kb upstream 1.0kb upstream 2612 true Scaffold25993: 245789-248400 Boechera stricta
Bostr.25993s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 245789-246788 Boechera stricta
Bostr.25993s0046 1.0kb downstream 1.0kb downstream 2612 true Scaffold25993: 246789-249400 Boechera stricta
Bostr.25993s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 248401-249400 Boechera stricta
Bostr.25993s0046 2.0kb upstream 2.0kb upstream 3612 true Scaffold25993: 244789-248400 Boechera stricta
Bostr.25993s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 244789-246788 Boechera stricta
Bostr.25993s0046 2.0kb downstream 2.0kb downstream 3612 true Scaffold25993: 246789-250400 Boechera stricta
Bostr.25993s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 248401-250400 Boechera stricta
Bostr.25993s0046 5.0kb upstream 5.0kb upstream 6612 true Scaffold25993: 241789-248400 Boechera stricta
Bostr.25993s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 241789-246788 Boechera stricta
Bostr.25993s0046 5.0kb downstream 5.0kb downstream 6612 true Scaffold25993: 246789-253400 Boechera stricta
Bostr.25993s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 248401-253400 Boechera stricta
Bostr.25993s0046 10.0kb upstream 10.0kb upstream 11612 true Scaffold25993: 236789-248400 Boechera stricta
Bostr.25993s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 236789-246788 Boechera stricta
Bostr.25993s0046 10.0kb downstream 10.0kb downstream 11612 true Scaffold25993: 246789-258400 Boechera stricta
Bostr.25993s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 248401-258400 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365540 5261 Brassicaceae View MSA
123829587 5264 Brassicales-Malvales View MSA
124341086 5266 SBM View MSA
124253823 5268 Malvidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain