Gene : Bostr.26527s0317 B. stricta v1.2
Defline:  (1 of 4) PTHR10182 - CALCIUM-BINDING PROTEIN 39-RELATED Genomic Order:  317
Name:  ? Bostr.26527s0317 Secondary Identifier:  ? PAC:30654248
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26527s0317 0.5kb upstream 0.5kb upstream 3264 true Scaffold26527: 1849182-1852445 Boechera stricta
Bostr.26527s0317 0.5kb upstream 0.5kb upstream 500 false Scaffold26527: 1851946-1852445 Boechera stricta
Bostr.26527s0317 0.5kb downstream 0.5kb downstream 3264 true Scaffold26527: 1848682-1851945 Boechera stricta
Bostr.26527s0317 0.5kb downstream 0.5kb downstream 500 false Scaffold26527: 1848682-1849181 Boechera stricta
Bostr.26527s0317 1.0kb upstream 1.0kb upstream 3764 true Scaffold26527: 1849182-1852945 Boechera stricta
Bostr.26527s0317 1.0kb upstream 1.0kb upstream 1000 false Scaffold26527: 1851946-1852945 Boechera stricta
Bostr.26527s0317 1.0kb downstream 1.0kb downstream 3764 true Scaffold26527: 1848182-1851945 Boechera stricta
Bostr.26527s0317 1.0kb downstream 1.0kb downstream 1000 false Scaffold26527: 1848182-1849181 Boechera stricta
Bostr.26527s0317 2.0kb upstream 2.0kb upstream 4764 true Scaffold26527: 1849182-1853945 Boechera stricta
Bostr.26527s0317 2.0kb upstream 2.0kb upstream 2000 false Scaffold26527: 1851946-1853945 Boechera stricta
Bostr.26527s0317 2.0kb downstream 2.0kb downstream 4764 true Scaffold26527: 1847182-1851945 Boechera stricta
Bostr.26527s0317 2.0kb downstream 2.0kb downstream 2000 false Scaffold26527: 1847182-1849181 Boechera stricta
Bostr.26527s0317 5.0kb upstream 5.0kb upstream 7764 true Scaffold26527: 1849182-1856945 Boechera stricta
Bostr.26527s0317 5.0kb upstream 5.0kb upstream 5000 false Scaffold26527: 1851946-1856945 Boechera stricta
Bostr.26527s0317 5.0kb downstream 5.0kb downstream 7764 true Scaffold26527: 1844182-1851945 Boechera stricta
Bostr.26527s0317 5.0kb downstream 5.0kb downstream 5000 false Scaffold26527: 1844182-1849181 Boechera stricta
Bostr.26527s0317 10.0kb upstream 10.0kb upstream 12764 true Scaffold26527: 1849182-1861945 Boechera stricta
Bostr.26527s0317 10.0kb upstream 10.0kb upstream 10000 false Scaffold26527: 1851946-1861945 Boechera stricta
Bostr.26527s0317 10.0kb downstream 10.0kb downstream 12764 true Scaffold26527: 1839182-1851945 Boechera stricta
Bostr.26527s0317 10.0kb downstream 10.0kb downstream 10000 false Scaffold26527: 1839182-1849181 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363793 5261 Brassicaceae View MSA
123833763 5264 Brassicales-Malvales View MSA
124336582 5266 SBM View MSA
124238519 5268 Malvidae View MSA
124069173 5270 Rosid View MSA
123738431 5271 Pentapetalae View MSA
122796867 5272 Eudicot View MSA
122042724 5273 Angiosperm View MSA
121345752 5274 Embryophyte View MSA
123425225 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain