Gene : Bostr.26527s0171 B. stricta v1.2
Defline:  (1 of 4) 2.4.1.14 - Sucrose-phosphate synthase / UDP-glucose-fructose-phosphate glucosyltransferase Genomic Order:  171
Name:  ? Bostr.26527s0171 Secondary Identifier:  ? PAC:30654396
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7238 Boechera stricta pathologic  
Bstricta SUCSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26527s0171 0.5kb upstream 0.5kb upstream 6403 true Scaffold26527: 1165289-1171691 Boechera stricta
Bostr.26527s0171 0.5kb upstream 0.5kb upstream 500 false Scaffold26527: 1165289-1165788 Boechera stricta
Bostr.26527s0171 0.5kb downstream 0.5kb downstream 6403 true Scaffold26527: 1165789-1172191 Boechera stricta
Bostr.26527s0171 0.5kb downstream 0.5kb downstream 500 false Scaffold26527: 1171692-1172191 Boechera stricta
Bostr.26527s0171 1.0kb upstream 1.0kb upstream 6903 true Scaffold26527: 1164789-1171691 Boechera stricta
Bostr.26527s0171 1.0kb upstream 1.0kb upstream 1000 false Scaffold26527: 1164789-1165788 Boechera stricta
Bostr.26527s0171 1.0kb downstream 1.0kb downstream 6903 true Scaffold26527: 1165789-1172691 Boechera stricta
Bostr.26527s0171 1.0kb downstream 1.0kb downstream 1000 false Scaffold26527: 1171692-1172691 Boechera stricta
Bostr.26527s0171 2.0kb upstream 2.0kb upstream 7903 true Scaffold26527: 1163789-1171691 Boechera stricta
Bostr.26527s0171 2.0kb upstream 2.0kb upstream 2000 false Scaffold26527: 1163789-1165788 Boechera stricta
Bostr.26527s0171 2.0kb downstream 2.0kb downstream 7903 true Scaffold26527: 1165789-1173691 Boechera stricta
Bostr.26527s0171 2.0kb downstream 2.0kb downstream 2000 false Scaffold26527: 1171692-1173691 Boechera stricta
Bostr.26527s0171 5.0kb upstream 5.0kb upstream 10903 true Scaffold26527: 1160789-1171691 Boechera stricta
Bostr.26527s0171 5.0kb upstream 5.0kb upstream 5000 false Scaffold26527: 1160789-1165788 Boechera stricta
Bostr.26527s0171 5.0kb downstream 5.0kb downstream 10903 true Scaffold26527: 1165789-1176691 Boechera stricta
Bostr.26527s0171 5.0kb downstream 5.0kb downstream 5000 false Scaffold26527: 1171692-1176691 Boechera stricta
Bostr.26527s0171 10.0kb upstream 10.0kb upstream 15903 true Scaffold26527: 1155789-1171691 Boechera stricta
Bostr.26527s0171 10.0kb upstream 10.0kb upstream 10000 false Scaffold26527: 1155789-1165788 Boechera stricta
Bostr.26527s0171 10.0kb downstream 10.0kb downstream 15903 true Scaffold26527: 1165789-1181691 Boechera stricta
Bostr.26527s0171 10.0kb downstream 10.0kb downstream 10000 false Scaffold26527: 1171692-1181691 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365865 5261 Brassicaceae View MSA
123829547 5264 Brassicales-Malvales View MSA
124337284 5266 SBM View MSA
124251669 5268 Malvidae View MSA
124062800 5270 Rosid View MSA
123741512 5271 Pentapetalae View MSA
122790617 5272 Eudicot View MSA
122047849 5273 Angiosperm View MSA
121310805 5274 Embryophyte View MSA
123348202 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain