Gene : Bostr.25993s0404 B. stricta v1.2
Defline:  (1 of 1) PTHR31155:SF9 - ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 7, CHLOROPLASTIC Genomic Order:  404
Name:  ? Bostr.25993s0404 Secondary Identifier:  ? PAC:30667418
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5147 Boechera stricta pathologic  
Bstricta PWY-5156 Boechera stricta pathologic  
Bstricta PWY-5366 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0404 0.5kb upstream 0.5kb upstream 3374 true Scaffold25993: 1887648-1891021 Boechera stricta
Bostr.25993s0404 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 1890522-1891021 Boechera stricta
Bostr.25993s0404 0.5kb downstream 0.5kb downstream 3374 true Scaffold25993: 1887148-1890521 Boechera stricta
Bostr.25993s0404 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 1887148-1887647 Boechera stricta
Bostr.25993s0404 1.0kb upstream 1.0kb upstream 3874 true Scaffold25993: 1887648-1891521 Boechera stricta
Bostr.25993s0404 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 1890522-1891521 Boechera stricta
Bostr.25993s0404 1.0kb downstream 1.0kb downstream 3874 true Scaffold25993: 1886648-1890521 Boechera stricta
Bostr.25993s0404 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 1886648-1887647 Boechera stricta
Bostr.25993s0404 2.0kb upstream 2.0kb upstream 4874 true Scaffold25993: 1887648-1892521 Boechera stricta
Bostr.25993s0404 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 1890522-1892521 Boechera stricta
Bostr.25993s0404 2.0kb downstream 2.0kb downstream 4874 true Scaffold25993: 1885648-1890521 Boechera stricta
Bostr.25993s0404 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 1885648-1887647 Boechera stricta
Bostr.25993s0404 5.0kb upstream 5.0kb upstream 7874 true Scaffold25993: 1887648-1895521 Boechera stricta
Bostr.25993s0404 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 1890522-1895521 Boechera stricta
Bostr.25993s0404 5.0kb downstream 5.0kb downstream 7874 true Scaffold25993: 1882648-1890521 Boechera stricta
Bostr.25993s0404 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 1882648-1887647 Boechera stricta
Bostr.25993s0404 10.0kb upstream 10.0kb upstream 12874 true Scaffold25993: 1887648-1900521 Boechera stricta
Bostr.25993s0404 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 1890522-1900521 Boechera stricta
Bostr.25993s0404 10.0kb downstream 10.0kb downstream 12874 true Scaffold25993: 1877648-1890521 Boechera stricta
Bostr.25993s0404 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 1877648-1887647 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373650 5261 Brassicaceae View MSA
123840023 5264 Brassicales-Malvales View MSA
124345427 5266 SBM View MSA
124243967 5268 Malvidae View MSA
124069229 5270 Rosid View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain