Gene : Bostr.25993s0365 B. stricta v1.2

Defline:  (1 of 48) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  365
Name:  ? Bostr.25993s0365 Secondary Identifier:  ? PAC:30667893

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0365 0.5kb upstream 0.5kb upstream 2452 true Scaffold25993: 1749298-1751749 Boechera stricta
Bostr.25993s0365 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 1751250-1751749 Boechera stricta
Bostr.25993s0365 0.5kb downstream 0.5kb downstream 2452 true Scaffold25993: 1748798-1751249 Boechera stricta
Bostr.25993s0365 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 1748798-1749297 Boechera stricta
Bostr.25993s0365 1.0kb upstream 1.0kb upstream 2952 true Scaffold25993: 1749298-1752249 Boechera stricta
Bostr.25993s0365 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 1751250-1752249 Boechera stricta
Bostr.25993s0365 1.0kb downstream 1.0kb downstream 2952 true Scaffold25993: 1748298-1751249 Boechera stricta
Bostr.25993s0365 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 1748298-1749297 Boechera stricta
Bostr.25993s0365 2.0kb upstream 2.0kb upstream 3952 true Scaffold25993: 1749298-1753249 Boechera stricta
Bostr.25993s0365 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 1751250-1753249 Boechera stricta
Bostr.25993s0365 2.0kb downstream 2.0kb downstream 3952 true Scaffold25993: 1747298-1751249 Boechera stricta
Bostr.25993s0365 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 1747298-1749297 Boechera stricta
Bostr.25993s0365 5.0kb upstream 5.0kb upstream 6952 true Scaffold25993: 1749298-1756249 Boechera stricta
Bostr.25993s0365 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 1751250-1756249 Boechera stricta
Bostr.25993s0365 5.0kb downstream 5.0kb downstream 6952 true Scaffold25993: 1744298-1751249 Boechera stricta
Bostr.25993s0365 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 1744298-1749297 Boechera stricta
Bostr.25993s0365 10.0kb upstream 10.0kb upstream 11952 true Scaffold25993: 1749298-1761249 Boechera stricta
Bostr.25993s0365 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 1751250-1761249 Boechera stricta
Bostr.25993s0365 10.0kb downstream 10.0kb downstream 11952 true Scaffold25993: 1739298-1751249 Boechera stricta
Bostr.25993s0365 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 1739298-1749297 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370652 5261 Brassicaceae View MSA
123840240 5264 Brassicales-Malvales View MSA
124345143 5266 SBM View MSA
124243154 5268 Malvidae View MSA
124066390 5270 Rosid View MSA
123747844 5271 Pentapetalae View MSA
122788467 5272 Eudicot View MSA
122045066 5273 Angiosperm View MSA
121350373 5274 Embryophyte View MSA
123381702 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain