Gene : Bostr.25993s0376 B. stricta v1.2
Defline:  (1 of 3) 2.1.1.165 - Methyl halide transferase / Methyl chloride transferase Genomic Order:  376
Name:  ? Bostr.25993s0376 Secondary Identifier:  ? PAC:30667413
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6730 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0376 0.5kb upstream 0.5kb upstream 2437 true Scaffold25993: 1776888-1779324 Boechera stricta
Bostr.25993s0376 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 1776888-1777387 Boechera stricta
Bostr.25993s0376 0.5kb downstream 0.5kb downstream 2437 true Scaffold25993: 1777388-1779824 Boechera stricta
Bostr.25993s0376 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 1779325-1779824 Boechera stricta
Bostr.25993s0376 1.0kb upstream 1.0kb upstream 2937 true Scaffold25993: 1776388-1779324 Boechera stricta
Bostr.25993s0376 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 1776388-1777387 Boechera stricta
Bostr.25993s0376 1.0kb downstream 1.0kb downstream 2937 true Scaffold25993: 1777388-1780324 Boechera stricta
Bostr.25993s0376 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 1779325-1780324 Boechera stricta
Bostr.25993s0376 2.0kb upstream 2.0kb upstream 3937 true Scaffold25993: 1775388-1779324 Boechera stricta
Bostr.25993s0376 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 1775388-1777387 Boechera stricta
Bostr.25993s0376 2.0kb downstream 2.0kb downstream 3937 true Scaffold25993: 1777388-1781324 Boechera stricta
Bostr.25993s0376 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 1779325-1781324 Boechera stricta
Bostr.25993s0376 5.0kb upstream 5.0kb upstream 6937 true Scaffold25993: 1772388-1779324 Boechera stricta
Bostr.25993s0376 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 1772388-1777387 Boechera stricta
Bostr.25993s0376 5.0kb downstream 5.0kb downstream 6937 true Scaffold25993: 1777388-1784324 Boechera stricta
Bostr.25993s0376 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 1779325-1784324 Boechera stricta
Bostr.25993s0376 10.0kb upstream 10.0kb upstream 11937 true Scaffold25993: 1767388-1779324 Boechera stricta
Bostr.25993s0376 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 1767388-1777387 Boechera stricta
Bostr.25993s0376 10.0kb downstream 10.0kb downstream 11937 true Scaffold25993: 1777388-1789324 Boechera stricta
Bostr.25993s0376 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 1779325-1789324 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040998 5273 Angiosperm View MSA
122369932 5261 Brassicaceae View MSA
123830657 5264 Brassicales-Malvales View MSA
124340535 5266 SBM View MSA
124249928 5268 Malvidae View MSA
124062480 5270 Rosid View MSA
123741516 5271 Pentapetalae View MSA
122787358 5272 Eudicot View MSA
121346954 5274 Embryophyte View MSA
123424412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain