Gene : Bostr.26675s0330 B. stricta v1.2

Defline:  (1 of 3) PTHR31734:SF30 - AUXIN-RESPONSIVE PROTEIN IAA14-RELATED Genomic Order:  330
Name:  ? Bostr.26675s0330 Secondary Identifier:  ? PAC:30668489

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26675s0330 0.5kb upstream 0.5kb upstream 2986 true Scaffold26675: 2027920-2030905 Boechera stricta
Bostr.26675s0330 0.5kb upstream 0.5kb upstream 500 false Scaffold26675: 2030406-2030905 Boechera stricta
Bostr.26675s0330 0.5kb downstream 0.5kb downstream 2986 true Scaffold26675: 2027420-2030405 Boechera stricta
Bostr.26675s0330 0.5kb downstream 0.5kb downstream 500 false Scaffold26675: 2027420-2027919 Boechera stricta
Bostr.26675s0330 1.0kb upstream 1.0kb upstream 3486 true Scaffold26675: 2027920-2031405 Boechera stricta
Bostr.26675s0330 1.0kb upstream 1.0kb upstream 1000 false Scaffold26675: 2030406-2031405 Boechera stricta
Bostr.26675s0330 1.0kb downstream 1.0kb downstream 3486 true Scaffold26675: 2026920-2030405 Boechera stricta
Bostr.26675s0330 1.0kb downstream 1.0kb downstream 1000 false Scaffold26675: 2026920-2027919 Boechera stricta
Bostr.26675s0330 2.0kb upstream 2.0kb upstream 4486 true Scaffold26675: 2027920-2032405 Boechera stricta
Bostr.26675s0330 2.0kb upstream 2.0kb upstream 2000 false Scaffold26675: 2030406-2032405 Boechera stricta
Bostr.26675s0330 2.0kb downstream 2.0kb downstream 4486 true Scaffold26675: 2025920-2030405 Boechera stricta
Bostr.26675s0330 2.0kb downstream 2.0kb downstream 2000 false Scaffold26675: 2025920-2027919 Boechera stricta
Bostr.26675s0330 5.0kb upstream 5.0kb upstream 7486 true Scaffold26675: 2027920-2035405 Boechera stricta
Bostr.26675s0330 5.0kb upstream 5.0kb upstream 5000 false Scaffold26675: 2030406-2035405 Boechera stricta
Bostr.26675s0330 5.0kb downstream 5.0kb downstream 7486 true Scaffold26675: 2022920-2030405 Boechera stricta
Bostr.26675s0330 5.0kb downstream 5.0kb downstream 5000 false Scaffold26675: 2022920-2027919 Boechera stricta
Bostr.26675s0330 10.0kb upstream 10.0kb upstream 12486 true Scaffold26675: 2027920-2040405 Boechera stricta
Bostr.26675s0330 10.0kb upstream 10.0kb upstream 10000 false Scaffold26675: 2030406-2040405 Boechera stricta
Bostr.26675s0330 10.0kb downstream 10.0kb downstream 12486 true Scaffold26675: 2017920-2030405 Boechera stricta
Bostr.26675s0330 10.0kb downstream 10.0kb downstream 10000 false Scaffold26675: 2017920-2027919 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379489 5261 Brassicaceae View MSA
123802296 5264 Brassicales-Malvales View MSA
124299505 5266 SBM View MSA
124150901 5268 Malvidae View MSA
123876438 5270 Rosid View MSA
123460116 5271 Pentapetalae View MSA
122495495 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain