Gene : Bostr.19424s0723 B. stricta v1.2
Defline:  (1 of 3) PTHR22849:SF52 - E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED Genomic Order:  723
Name:  ? Bostr.19424s0723 Secondary Identifier:  ? PAC:30661371
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0723 0.5kb upstream 0.5kb upstream 2164 true Scaffold19424: 5563075-5565238 Boechera stricta
Bostr.19424s0723 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 5563075-5563574 Boechera stricta
Bostr.19424s0723 0.5kb downstream 0.5kb downstream 2164 true Scaffold19424: 5563575-5565738 Boechera stricta
Bostr.19424s0723 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 5565239-5565738 Boechera stricta
Bostr.19424s0723 1.0kb upstream 1.0kb upstream 2664 true Scaffold19424: 5562575-5565238 Boechera stricta
Bostr.19424s0723 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 5562575-5563574 Boechera stricta
Bostr.19424s0723 1.0kb downstream 1.0kb downstream 2664 true Scaffold19424: 5563575-5566238 Boechera stricta
Bostr.19424s0723 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 5565239-5566238 Boechera stricta
Bostr.19424s0723 2.0kb upstream 2.0kb upstream 3664 true Scaffold19424: 5561575-5565238 Boechera stricta
Bostr.19424s0723 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 5561575-5563574 Boechera stricta
Bostr.19424s0723 2.0kb downstream 2.0kb downstream 3664 true Scaffold19424: 5563575-5567238 Boechera stricta
Bostr.19424s0723 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 5565239-5567238 Boechera stricta
Bostr.19424s0723 5.0kb upstream 5.0kb upstream 6664 true Scaffold19424: 5558575-5565238 Boechera stricta
Bostr.19424s0723 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 5558575-5563574 Boechera stricta
Bostr.19424s0723 5.0kb downstream 5.0kb downstream 6664 true Scaffold19424: 5563575-5570238 Boechera stricta
Bostr.19424s0723 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 5565239-5570238 Boechera stricta
Bostr.19424s0723 10.0kb upstream 10.0kb upstream 11664 true Scaffold19424: 5553575-5565238 Boechera stricta
Bostr.19424s0723 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 5553575-5563574 Boechera stricta
Bostr.19424s0723 10.0kb downstream 10.0kb downstream 11664 true Scaffold19424: 5563575-5575238 Boechera stricta
Bostr.19424s0723 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 5565239-5575238 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379153 5261 Brassicaceae View MSA
123802114 5264 Brassicales-Malvales View MSA
124299332 5266 SBM View MSA
124246737 5268 Malvidae View MSA
124065727 5270 Rosid View MSA
123740066 5271 Pentapetalae View MSA
122793707 5272 Eudicot View MSA
122045522 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain