Gene : Bostr.19424s0495 B. stricta v1.2

Defline:  (1 of 2) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 Genomic Order:  495
Name:  ? Bostr.19424s0495 Secondary Identifier:  ? PAC:30660810

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0495 0.5kb upstream 0.5kb upstream 1121 true Scaffold19424: 4244541-4245661 Boechera stricta
Bostr.19424s0495 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 4245162-4245661 Boechera stricta
Bostr.19424s0495 0.5kb downstream 0.5kb downstream 1121 true Scaffold19424: 4244041-4245161 Boechera stricta
Bostr.19424s0495 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 4244041-4244540 Boechera stricta
Bostr.19424s0495 1.0kb upstream 1.0kb upstream 1621 true Scaffold19424: 4244541-4246161 Boechera stricta
Bostr.19424s0495 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 4245162-4246161 Boechera stricta
Bostr.19424s0495 1.0kb downstream 1.0kb downstream 1621 true Scaffold19424: 4243541-4245161 Boechera stricta
Bostr.19424s0495 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 4243541-4244540 Boechera stricta
Bostr.19424s0495 2.0kb upstream 2.0kb upstream 2621 true Scaffold19424: 4244541-4247161 Boechera stricta
Bostr.19424s0495 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 4245162-4247161 Boechera stricta
Bostr.19424s0495 2.0kb downstream 2.0kb downstream 2621 true Scaffold19424: 4242541-4245161 Boechera stricta
Bostr.19424s0495 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 4242541-4244540 Boechera stricta
Bostr.19424s0495 5.0kb upstream 5.0kb upstream 5621 true Scaffold19424: 4244541-4250161 Boechera stricta
Bostr.19424s0495 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 4245162-4250161 Boechera stricta
Bostr.19424s0495 5.0kb downstream 5.0kb downstream 5621 true Scaffold19424: 4239541-4245161 Boechera stricta
Bostr.19424s0495 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 4239541-4244540 Boechera stricta
Bostr.19424s0495 10.0kb upstream 10.0kb upstream 10621 true Scaffold19424: 4244541-4255161 Boechera stricta
Bostr.19424s0495 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 4245162-4255161 Boechera stricta
Bostr.19424s0495 10.0kb downstream 10.0kb downstream 10621 true Scaffold19424: 4234541-4245161 Boechera stricta
Bostr.19424s0495 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 4234541-4244540 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370824 5261 Brassicaceae View MSA
123838098 5264 Brassicales-Malvales View MSA
124349774 5266 SBM View MSA
124249306 5268 Malvidae View MSA
124066141 5270 Rosid View MSA
123749826 5271 Pentapetalae View MSA
122795559 5272 Eudicot View MSA
122046671 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain